Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0664
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 78 1e-14
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 78 1e-14
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 78 1e-14
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 78 1e-14
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 78 1e-14
DQ104440-1|AAZ20186.1| 384|Homo sapiens expressed in activated ... 29 4.8
BC035648-1|AAH35648.1| 444|Homo sapiens TMC6 protein protein. 29 4.8
BC023597-1|AAH23597.1| 805|Homo sapiens transmembrane channel-l... 29 4.8
BC018346-1|AAH18346.2| 513|Homo sapiens TMC6 protein protein. 29 4.8
AY236496-1|AAP69874.1| 805|Homo sapiens transmembrane channel-l... 29 4.8
AY099356-1|AAM44452.1| 805|Homo sapiens large EVER1 protein pro... 29 4.8
AY057379-1|AAL25836.1| 805|Homo sapiens EVIN1 protein. 29 4.8
AK074065-1|BAB84891.1| 811|Homo sapiens FLJ00136 protein protein. 29 4.8
AB002405-1|BAA24179.2| 444|Homo sapiens LAK-4p protein. 29 4.8
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 28 8.4
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 77.8 bits (183), Expect = 1e-14
Identities = 42/77 (54%), Positives = 48/77 (62%)
Frame = +2
Query: 116 LNNQVLFDKPTYEKLYKEVPQYKLITPGCRI*KVKGPRFPGEKSTHQLREKGLIKQVVQH 295
LNN VLFDK TY+KL KEVP YKLITP ++K + +L KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 296 HGQVIYTRATKGDDPVA 346
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 77.8 bits (183), Expect = 1e-14
Identities = 42/77 (54%), Positives = 48/77 (62%)
Frame = +2
Query: 116 LNNQVLFDKPTYEKLYKEVPQYKLITPGCRI*KVKGPRFPGEKSTHQLREKGLIKQVVQH 295
LNN VLFDK TY+KL KEVP YKLITP ++K + +L KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 296 HGQVIYTRATKGDDPVA 346
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 77.8 bits (183), Expect = 1e-14
Identities = 42/77 (54%), Positives = 48/77 (62%)
Frame = +2
Query: 116 LNNQVLFDKPTYEKLYKEVPQYKLITPGCRI*KVKGPRFPGEKSTHQLREKGLIKQVVQH 295
LNN VLFDK TY+KL KEVP YKLITP ++K + +L KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 296 HGQVIYTRATKGDDPVA 346
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 77.8 bits (183), Expect = 1e-14
Identities = 42/77 (54%), Positives = 48/77 (62%)
Frame = +2
Query: 116 LNNQVLFDKPTYEKLYKEVPQYKLITPGCRI*KVKGPRFPGEKSTHQLREKGLIKQVVQH 295
LNN VLFDK TY+KL KEVP YKLITP ++K + +L KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 296 HGQVIYTRATKGDDPVA 346
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 77.8 bits (183), Expect = 1e-14
Identities = 42/77 (54%), Positives = 48/77 (62%)
Frame = +2
Query: 116 LNNQVLFDKPTYEKLYKEVPQYKLITPGCRI*KVKGPRFPGEKSTHQLREKGLIKQVVQH 295
LNN VLFDK TY+KL KEVP YKLITP ++K + +L KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 296 HGQVIYTRATKGDDPVA 346
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>DQ104440-1|AAZ20186.1| 384|Homo sapiens expressed in activated
T/LAK lymphocytes protein.
Length = 384
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 286 RVSWLPWVHRYLMENTFFVFLVSALL 311
>BC035648-1|AAH35648.1| 444|Homo sapiens TMC6 protein protein.
Length = 444
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 346 RVSWLPWVHRYLMENTFFVFLVSALL 371
>BC023597-1|AAH23597.1| 805|Homo sapiens transmembrane channel-like
6 protein.
Length = 805
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 707 RVSWLPWVHRYLMENTFFVFLVSALL 732
>BC018346-1|AAH18346.2| 513|Homo sapiens TMC6 protein protein.
Length = 513
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 415 RVSWLPWVHRYLMENTFFVFLVSALL 440
>AY236496-1|AAP69874.1| 805|Homo sapiens transmembrane channel-like
protein 6 protein.
Length = 805
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 707 RVSWLPWVHRYLMENTFFVFLVSALL 732
>AY099356-1|AAM44452.1| 805|Homo sapiens large EVER1 protein
protein.
Length = 805
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 707 RVSWLPWVHRYLMENTFFVFLVSALL 732
>AY057379-1|AAL25836.1| 805|Homo sapiens EVIN1 protein.
Length = 805
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 707 RVSWLPWVHRYLMENTFFVFLVSALL 732
>AK074065-1|BAB84891.1| 811|Homo sapiens FLJ00136 protein protein.
Length = 811
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 713 RVSWLPWVHRYLMENTFFVFLVSALL 738
>AB002405-1|BAA24179.2| 444|Homo sapiens LAK-4p protein.
Length = 444
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 316 RVDHLPMVLDYLFDETFFPKLMSALL 239
RV LP V YL + TFF L+SALL
Sbjct: 346 RVSWLPWVHRYLMENTFFVFLVSALL 371
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 176 VGLPCTVSHMWVYQTTPGCSTCH 108
+GL T +H W Y+ P CS C+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACY 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,557,525
Number of Sequences: 237096
Number of extensions: 1481689
Number of successful extensions: 6880
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6852
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -