Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0663
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-8|AAC77510.1| 89|Caenorhabditis elegans Dynein light ch... 105 2e-23
Z68507-5|CAA92827.2| 90|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical... 47 9e-06
Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 35 0.029
AL161711-3|CAL63993.1| 129|Caenorhabditis elegans Hypothetical ... 33 0.087
AL161711-2|CAD31700.1| 111|Caenorhabditis elegans Hypothetical ... 33 0.087
AL161711-1|CAE17960.1| 134|Caenorhabditis elegans Hypothetical ... 30 0.81
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 4.3
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 28 4.3
Z70307-9|CAE54887.1| 246|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z70307-8|CAA94333.2| 248|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF039047-11|AAB94230.1| 354|Caenorhabditis elegans Prion-like-(... 27 10.0
>U00043-8|AAC77510.1| 89|Caenorhabditis elegans Dynein light chain
protein 1 protein.
Length = 89
Score = 105 bits (251), Expect = 2e-23
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
M DRKAVIKNADMS++MQQDA+DCATQALEK+NIEKDIAA+IKKEFDKKYNPT
Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPT 53
Score = 77.8 bits (183), Expect = 4e-15
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQXAILLFKSG 361
HCIVGRNFGSYVTHET+HFIYFYLGQ AILLFKSG
Sbjct: 55 HCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>Z68507-5|CAA92827.2| 90|Caenorhabditis elegans Hypothetical
protein M18.2 protein.
Length = 90
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPT 254
M + K +K DM + + + +A +NI+KD+AAF+K+E DKK+ T
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGAT 53
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQXAILLFKSG 361
H I G+ FGS V++E HFI + ++++K G
Sbjct: 55 HVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
>AC084197-38|AAU87807.1| 186|Caenorhabditis elegans Hypothetical
protein Y73B6BL.43 protein.
Length = 186
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLGQXAILLFKS 358
HCI G++FGS+VT E FIYF +G A +LFK+
Sbjct: 107 HCICGKHFGSFVTFEPDSFIYFRIGTIAFMLFKT 140
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 111 AVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNP 251
A ++++ M M+Q+A A +++ +++E DIA +K FD++Y P
Sbjct: 58 ADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDREYGP 104
>Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical
protein C47A10.6 protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Frame = -3
Query: 263 CNAGRIVFLVKFFLDECSYVL--FNVKFLERLSCTVNSILLH----LFAHVSILY----- 117
C+A + +L+ +L C Y L FN+KFL ++ C ++L+H F H+ LY
Sbjct: 34 CSAVAVFYLIHTWLSICRYKLMHFNLKFLMKIHCA--ALLIHCVPRFFLHLFDLYYYFFG 91
Query: 116 -DCFAITHLVLGLFLLR 69
DC+ + L F+LR
Sbjct: 92 VDCYDMQPSSLRCFILR 108
>AL161711-3|CAL63993.1| 129|Caenorhabditis elegans Hypothetical
protein Y10G11A.2b protein.
Length = 129
Score = 33.5 bits (73), Expect = 0.087
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKY 245
+I++ ++ E +++ AL+ IE +IA+F+K++FD KY
Sbjct: 51 IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKY 94
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQXAILLFK 355
C+VGRNFGS++ + FI+F + + +++LF+
Sbjct: 100 CVVGRNFGSHL--DPIQFIHFTVSKISVILFR 129
>AL161711-2|CAD31700.1| 111|Caenorhabditis elegans Hypothetical
protein Y10G11A.2a protein.
Length = 111
Score = 33.5 bits (73), Expect = 0.087
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKY 245
+I++ ++ E +++ AL+ IE +IA+F+K++FD KY
Sbjct: 33 IIQDTNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAKY 76
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 260 CIVGRNFGSYVTHETRHFIYFYLGQXAILLFK 355
C+VGRNFGS++ + FI+F + + +++LF+
Sbjct: 82 CVVGRNFGSHL--DPIQFIHFTVSKISVILFR 111
>AL161711-1|CAE17960.1| 134|Caenorhabditis elegans Hypothetical
protein Y10G11A.3 protein.
Length = 134
Score = 30.3 bits (65), Expect = 0.81
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 114 VIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKK 242
+I+ ++ E +++ AL+ IE +IA+F+K++FD K
Sbjct: 50 IIQETNLPFEQVEESKKMLGDALQLCGIENEIASFMKRKFDAK 92
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -2
Query: 300 SCVTYEPKXRPTMQCR*DCISCQILS**MQLCPFQC*ISRALELHSQQHLAASLRSCQHS 121
+CVT RP QC C+ S +CP QC S + Q + + C
Sbjct: 292 ACVTNLQVSRPVSQCLPACMPSCTSSCVQSMCPQQCYPSCDMNCIQQYAVQMAPTPCAAQ 351
Query: 120 L*LLCDHTSCL 88
LC+ +SC+
Sbjct: 352 CMPLCE-SSCI 361
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 227 FLDECSYVLFNVKFLERLSCTVNSILLHLFAH--VSILYDCFAITHLVLGLFLLR 69
++D C+ LFN+ +R++ + + +F H V ++Y ++ + ++L +LR
Sbjct: 520 WMDVCTLPLFNITLSQRIATFATAPFMSIFLHWMVGMVYVFYSASFVILLREILR 574
>Z70307-9|CAE54887.1| 246|Caenorhabditis elegans Hypothetical
protein C39E9.8b protein.
Length = 246
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 138 EEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYN 248
EEM+ A DC +KF+ +KK FD+K N
Sbjct: 60 EEMKLQAKDCTVPCFQKFSSITSRPNDLKKCFDEKDN 96
>Z70307-8|CAA94333.2| 248|Caenorhabditis elegans Hypothetical
protein C39E9.8a protein.
Length = 248
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 138 EEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYN 248
EEM+ A DC +KF+ +KK FD+K N
Sbjct: 60 EEMKLQAKDCTVPCFQKFSSITSRPNDLKKCFDEKDN 96
>AF039047-11|AAB94230.1| 354|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 51
protein.
Length = 354
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 126 ADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTG 257
A++ + + D + +A NI+ D+ + ++KE++ K N +G
Sbjct: 8 AELYKSVMADVIANMKEAFLDENIDVDVLSQLRKEWEDKVNSSG 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,140,359
Number of Sequences: 27780
Number of extensions: 180741
Number of successful extensions: 549
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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