Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0661
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   2.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   2.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   3.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   6.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   6.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   6.8  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 359 YIIVYATGSSPLVARV*ITCPWCW 288
           Y+   ATG +  V    I CP  W
Sbjct: 272 YLYYVATGKASFVTVPMIVCPIVW 295


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 359 YIIVYATGSSPLVARV*ITCPWCW 288
           Y+   ATG +  V    I CP  W
Sbjct: 272 YLYYVATGKASFVTVPMIVCPIVW 295


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = -1

Query: 207 DTTAGVISLYCGTSLYSFSYVGLSXNTWLFNLSRTFPLDHFFFXALPPPDPSFF 46
           D T G+I+    T  +  S +    N     +   F + H F   +P    SF+
Sbjct: 21  DQTIGLITFDINTPSFKLSKIRSFLNITASAVLLPFAIYHIFMHIVPTKLISFY 74


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = +3

Query: 12  RLRPN--SLKKHRRRRKDP 62
           ++RP   S ++HR+  KDP
Sbjct: 252 KMRPKRQSSRRHRKNLKDP 270


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 340 LDHRPWSHACRSPAHG 293
           ++ RPWS  C  P  G
Sbjct: 352 VNERPWSLYCGEPPCG 367


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 149 MWVYXTTPGCSTCHELF 99
           MW    T GC+   ELF
Sbjct: 1   MWSNSLTAGCNPDSELF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,731
Number of Sequences: 336
Number of extensions: 1776
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)