Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0658
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 71 5e-13
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 70 1e-12
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 64 9e-11
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 64 9e-11
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 62 3e-10
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 60 9e-10
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 59 2e-09
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 44 6e-05
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.45
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 29 1.8
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 4.2
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 27 7.3
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 71.3 bits (167), Expect = 5e-13
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 270 DKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCT 446
D DKFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 447 AESVESRLSSDGVLSVIRTQEVPPA 521
S+ +R++ DG+L V ++ PPA
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSPPA 85
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 270 DKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEGCT 446
D KF + LDV F PEE+ VK + V + E ++HG+ + RQF R + LP
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVD 153
Query: 447 AESVESRLSSDGVLSV 494
+++ RL DGVL +
Sbjct: 154 MDTLVPRLGKDGVLYI 169
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 SSIKSDKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYAL 431
++ + + DK ++ LDV+++ PEEIS+K G I ++GKH+ + +HGY + +F R Y L
Sbjct: 31 ANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSEFHRSYNL 89
Query: 432 PEGCTAESVESRLSSDGVLSVIRTQEVPPAVE 527
P+G +V SR++ DG+L + + P E
Sbjct: 90 PDGVDVSTVSSRITGDGLLHIEALKAEPQETE 121
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 417 RRYALPEGCTAESVESRLSSDGVLSV 494
R + LP+ +S+ SRL DG L +
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYI 186
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 264 KSDKDKFQVNLDVQHFAPE 320
K D +F V LDV F+P+
Sbjct: 137 KIDDKRFTVTLDVSSFSPD 155
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 63.7 bits (148), Expect = 9e-11
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +3
Query: 267 SDKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 444 TAESVESRLSSDGVLSVIRTQEVPPAVEGE 533
A +V++R+S+ G L + + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +3
Query: 276 DKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 455
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 456 VESRLSSDGVLSVIRTQEVPPAV 524
+ +RL +G L + PA+
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAPAL 178
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 63.7 bits (148), Expect = 9e-11
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = +3
Query: 267 SDKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60
Query: 444 TAESVESRLSSDGVLSVIRTQEVPPAVEGE 533
A +V++R+S+ G L + + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +3
Query: 276 DKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 455
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 456 VESRLSSDGVLSVIRTQEVPPAV 524
+ +RL +G L + PA+
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAPAL 178
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 267 SDKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 444 TAESVESRLSSDGVLSVIRTQEVPPAVEGE 533
A +V++R+S+ G L + + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 276 DKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAE 452
D+ ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG A
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297
Query: 453 SVESRLSSDGVLSVIRTQEVPPAVEGE 533
+V++R+S+ G L + + +P GE
Sbjct: 298 NVKTRISNHGQLHIEAMKALPGPDGGE 324
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +3
Query: 276 DKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 455
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 456 VESRLSSDGVLSVIRTQEVPPAV 524
+ +RL +G L + PA+
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAPAL 178
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +3
Query: 276 DKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 455
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389
Query: 456 VESRLSSDGVLSVIRTQEVPPAV 524
+ +RL +G L + PA+
Sbjct: 390 LTTRLDKEGKLHFEAKKRNAPAL 412
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +3
Query: 267 SDKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60
Query: 444 TAESVESRLSSDGVLSVIRTQEVPPAVEGE 533
A +V++R+S+ G L + + +P GE
Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGE 90
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +3
Query: 276 DKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAES 455
DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ LP +S
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 456 VESRLSSDGVLSVIRTQEVPPAV 524
+ +RL +G L + PA+
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAPAL 178
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 294 LDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLS 473
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V SR+S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 474 SDGVLSVIRTQEVP-PAVEGER 536
+ G L + + +P P E E+
Sbjct: 71 NHGHLHIEARKALPKPEAELEK 92
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/87 (32%), Positives = 46/87 (52%)
Frame = +3
Query: 264 KSDKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
K+ +DKF + +DV F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 444 TAESVESRLSSDGVLSVIRTQEVPPAV 524
+S+ +RL +G L + V PA+
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSVAPAL 177
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/84 (33%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +3
Query: 267 SDKDKFQV-NLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
++++K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LPEG
Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 61
Query: 444 TAESVESRLSSDGVLSVIRTQEVP 515
A +V++R+S+ G L + + +P
Sbjct: 62 EASNVKTRISNHGQLHIEAMKALP 85
Score = 51.6 bits (118), Expect = 4e-07
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +3
Query: 264 KSDKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
+S DKF + +DV+ F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREV 151
Query: 444 TAESVESRLSSDGVLSVIRTQEVPPAV 524
+S+ +RL +G L + PA+
Sbjct: 152 DMDSLTTRLDKEGKLHFEAKKRNAPAL 178
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 SSIKSDKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYI-SRQFTRRYAL 431
S+ D KF + LDV F PEE+ VK + V + E ++HG+ +RQF R + L
Sbjct: 19 SAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVL 76
Query: 432 PE 437
P+
Sbjct: 77 PQ 78
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.45
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 366 KHEEKKDQHGYISRQFTRRYAL 431
KHEE++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Frame = -2
Query: 501 CELQTTHHLKTAGTPQIQPYSPPAKR--SDE*IDA--ICNHADL---SSPRVCLQPRCSR 343
C++ +T L+ AG PQ+ P S P R D + + + + D+ S P V P +
Sbjct: 761 CKMSSTSGLRIAGGPQLPPVSHPGIRHYQDRALTSQQVTSSHDMPRTSMPLVSYPPHMKK 820
Query: 342 PPF*QRFLPGRNAGRPGLLGTYPYHF--*CWTKVSSRGSKVHPRAVVFSA 199
PF P +A R G +H + S GS+ P V +S+
Sbjct: 821 SPFVVHH-PPDSASRHGNQAPEAHHHEPGSYKSPHSEGSRRTPSGVPYSS 869
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +3
Query: 207 ILPPVGAPCCRGSRPWSSIKSDKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKD 386
+L PV CR S+P+S I S+ + Q + ++ F+ E + +K+ + E+
Sbjct: 833 LLAPVRLGVCRPSQPFSLITSNIEATQASEEL--FSVEPLPLKSPSSATSEDADPHERPS 890
Query: 387 QHGYISRQFTRRYA 428
H + + RR A
Sbjct: 891 THRHRGTRHRRRQA 904
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 330 VKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 437
+++ GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 28.3 bits (60), Expect = 4.2
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 264 KSDKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 443
KSD FQ+ Q P ++ K + E K+EE D+HG I R+ T+
Sbjct: 1162 KSDLSTFQITPISQ--IPSSLTEK-----LQPETKYEEYVDEHGQIIRRTTKVKHTAVKQ 1214
Query: 444 TAESVESRLSSDGVLS-VIRTQEVPPAVE 527
+V ++ DGV + E PP VE
Sbjct: 1215 ERTTVTKTVTRDGVTTREANVIESPPEVE 1243
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.5 bits (58), Expect = 7.3
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +3
Query: 258 SIKSDKDKFQVNLDVQHFAPEEISVKTXDGYIVVEGKHEE-----KKDQHGYISRQFTRR 422
+I S +DK + + HFA E+ V+ YI E E +K Q +QF +
Sbjct: 1368 AIDSVRDKGEQLISCGHFAASEVEVRIEALYIQWEELLEASATKGRKLQEARDHQQFNQE 1427
Query: 423 YALPEGCTAESVESRLSSD 479
+ + C + LSSD
Sbjct: 1428 VDIADSCITDKETIVLSSD 1446
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 455 RFSRTALRQSVATSELTRYVTMLIFLLLVFAFNHDVAVXRFNRDF-FRGEML 303
RF+ + S + L Y +L+F ++F +N +FNR F F+ E++
Sbjct: 303 RFTCYNVLSSYFSVTLCIYYILLVFCAVIFVYNCAWTYTKFNRPFDFKKELM 354
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,010,310
Number of Sequences: 59808
Number of extensions: 403650
Number of successful extensions: 1174
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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