Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0657
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.50 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.50 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.2  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 143 LTSTDGDPIRAITVDKFVSF 202
           L +TDG+P+  + V+  +SF
Sbjct: 369 LIATDGEPVHPVRVNTIISF 388


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 143 LTSTDGDPIRAITVDKFVSF 202
           L +TDG+P+  + V+  +SF
Sbjct: 369 LIATDGEPVHPVRVNTIISF 388


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 321 RDANVRGDGNVFYESFVESLFSV 389
           RD NVR   N +YE+ V S + +
Sbjct: 113 RDVNVRAVVNQYYEAEVVSEYVI 135


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 390 QR*IGFQQNFHKIHFHRHGHLHHVAFHV 307
           QR    QQN +    +   H HH   H+
Sbjct: 303 QRQAAQQQNNNNAATNNQNHHHHAGHHI 330


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 76   GYILKRIISIENCHCVEKIITINFR 2
            GY +  I  + + HCVE +  I  R
Sbjct: 1244 GYFIGLITFVMSQHCVELVSMIKAR 1268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,475
Number of Sequences: 336
Number of extensions: 2005
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)