Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0657
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 42 3e-04
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 42 3e-04
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 41 5e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 41 5e-04
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 35 0.032
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08) 33 0.17
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14) 31 0.70
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 31 0.70
SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14) 30 0.92
SB_22162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 30 1.2
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 3.7
SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 28 4.9
SB_47424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_17656| Best HMM Match : TIR (HMM E-Value=1.3) 28 4.9
SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1) 28 4.9
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 28 4.9
SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_11258| Best HMM Match : efhand (HMM E-Value=1.4e-08) 27 6.5
SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05) 27 8.6
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 27 8.6
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFY--ESFVESLFSVAPELY 404
EL+ ++T+ E ++EE EM+R+A++ GDG V Y +S VE F + Y
Sbjct: 94 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDEDSLVEERFPIDTRSY 145
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFY--ESFVESLFSVAPELY 404
EL+ ++T+ E ++EE EM+R+A++ GDG V Y +S VE F + Y
Sbjct: 94 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDEDSLVEERFPIDTRSY 145
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/40 (37%), Positives = 30/40 (75%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVE 374
EL++++ S E S++E +EM+R+A++ GDG + ++ FV+
Sbjct: 94 ELRSVMASLGEKLSDDEIKEMMREADLDGDGVINFQEFVQ 133
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +3
Query: 249 N*ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFV 371
N EL+ ++ S + S+EE ++M+++ + G+G V +E F+
Sbjct: 19 NEELEVVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEFL 59
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESLF 383
EL+ ++T+ E ++EE EM+ +A++ GDG V YE V +F
Sbjct: 69 ELRHVMTNLGEKLTDEEVEEMIMEADIDGDGQVNYEGGVSYMF 111
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYE 362
EL+ ++T+ E ++EE EM+R+A++ GDG V YE
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 35.1 bits (77), Expect = 0.032
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFY 359
ELK ++++ E +++E EM+R+A++ GDG + Y
Sbjct: 384 ELKLVMSNLGERLTDDEVDEMIREADIDGDGMIDY 418
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESLFS 386
E+K + T +E+E E+++ A++ GDG++ YE F + S
Sbjct: 109 EMKFVFTCMGFNITEKEAVELVKQADMDGDGHINYEEFKNAFMS 152
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYE 362
E+K ++T +E+E E+++ A++ GDG++ YE
Sbjct: 238 EMKFVLTCMGFNITEKEAVELVKQADIDGDGHINYE 273
>SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08)
Length = 103
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESLFSVAP 395
EL+ +V E SE+E RE++ + DG + +E FVE + + P
Sbjct: 15 ELRYVVCHSGEKLSEDEARELIDMFDKNKDGQLSWEEFVEFIKTSMP 61
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFV 371
EL+ VT+ + +++E E++ + GDG + YE FV
Sbjct: 238 ELRVAVTTLGDALTQDEAEELIGMLDQDGDGKLGYEEFV 276
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFV 371
EL +T E F++EE EML A G +FY+ FV
Sbjct: 83 ELTKYMTEEGEAFTQEEVEEMLSAAVDPEKGVIFYKDFV 121
>SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14)
Length = 227
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVE 374
+LK I+T + P S+ +++R +R + YE F+E
Sbjct: 70 QLKRILTHFVFPMSDSLFEDLMRRCGIRASHKIGYEQFLE 109
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
E + ++ S+ P ++E+ +++ A + DG+V Y F+E L
Sbjct: 132 EFRRVLESFCFPMTQEQFVHIMKKAKLNRDGSVNYLEFLEKL 173
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVE 374
+LK I+T + P S+ +++R +R + YE F+E
Sbjct: 370 QLKRILTHFVFPMSDSLFEDLMRRCGIRASHKIGYEQFLE 409
>SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14)
Length = 148
Score = 30.3 bits (65), Expect = 0.92
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 195 CLS*TLKSFRHREKRFSRN*ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVE 374
CLS F H K + ++ ++ + +E E M+ A+ DG V +E F+
Sbjct: 84 CLSRVFNEFDHDSKGYILPSNIRRVLIKFNIDPNESEIEHMMEAADTNEDGKVDFEEFMH 143
Query: 375 SLFS 386
+FS
Sbjct: 144 -IFS 146
>SB_22162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 351 HFHRHGHLHHVAFHVSPLPRMVQRSLLQLFLVL 253
H HRH +LHH AFH ++ QLF +L
Sbjct: 167 HHHRHKYLHHHAFHFLSAAITLKPKHGQLFQLL 199
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 258 LKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
LK + S + FS+E+ ++LRDA + +G + Y F L
Sbjct: 122 LKEAMMSMGDRFSDEQVDDILRDAPIDKEGFLDYSKFTRIL 162
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 381 IGFQQNFHKIHFHRHGHLHHVAFH 310
I + H +H HRH H HH H
Sbjct: 564 ISTHPHHHHLHHHRHHHRHHHYHH 587
>SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 65 QNVSLRFNEDQLKEIGEWFENNAKPQLTSTDGDPIRAITVDKFVSFLNLKKFSTQRKEVF 244
Q + F++D + N + Q + GD + +SF L+K +Q ++ +
Sbjct: 1153 QGSTFSFSDDDINAHDSVSANRIRRQASMESGDEYDNAHAPQELSFERLQKNGSQAQKYW 1212
Query: 245 *KLRTKNN 268
KLR K N
Sbjct: 1213 DKLRAKRN 1220
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 86 NEDQLKEIGEWFENNAKPQLTSTDGDPIRAITVDKFVSFLNLKKFSTQRKEV 241
NE+Q + G W + + + +D P R +D+F S L+ F K +
Sbjct: 309 NENQSDKFGNWSDRRDESGVKLSDVSPYRLNRLDRFSSGLSNNPFPAIDKSI 360
>SB_47424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = -2
Query: 360 HKIHFHRHGHLHHVAFHVSPLPRMVQRSLLQLFLVL 253
H H H H H HH+ FH+ + ++ +++ + +++
Sbjct: 132 HHCHHHHHQHHHHL-FHIILITIIIIPTIITIIVII 166
>SB_17656| Best HMM Match : TIR (HMM E-Value=1.3)
Length = 719
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 53 YNPLQNVSLRF---NEDQLKEIGEWFENNAKPQLTSTDGDPIRAITVDKFVSFLNL 211
+N +NV++ F N ++ KE+GE +N ++G P+ ++ VS+ +L
Sbjct: 60 HNEGKNVAISFHSRNYEKAKELGELLRDNGYTAFLISEGSPLALALREQTVSWCDL 115
>SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)
Length = 175
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 375 FQQNFHKIHFHRHGHLHH 322
+ N H HFH H HLH+
Sbjct: 100 YHYNHHHHHFHLHHHLHY 117
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 258 LKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFV 371
LK + E ++EE +EM+ +A+ GDG + F+
Sbjct: 81 LKRVAKELGENLTDEELQEMIDEADRDGDGEINEAEFL 118
>SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 166 YQSDNSRQIRVFLKP*KVFDTEKRGFLEIEN*KQL*QATLNHS 294
Y S+ S++ ++ K +DTEK+G++ EN +Q+ +A N S
Sbjct: 578 YDSNGSQEEKI-PHAFKGYDTEKKGYITKENLRQMFKAYFNVS 619
>SB_11258| Best HMM Match : efhand (HMM E-Value=1.4e-08)
Length = 182
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 23 FFDTMAVLDAYNPLQNVSLRFNEDQLKEIGEWFENNAKPQLTSTDGDPIRAITVDKFV 196
F +V D ++ N ++ + D+ K++ +++A+P DG+ R IT +FV
Sbjct: 110 FLQLPSVFDEFDT--NHDMKISYDEFKKLLSMGDDSARPVFDFLDGNGDRNITCSEFV 165
>SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05)
Length = 901
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 291 FSEEETREMLRDANVRGDGN 350
FSE++ + MLRD N+ +GN
Sbjct: 221 FSEDDVKTMLRDLNIDKNGN 240
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 360 HKIHFHRHGHLHHVAFHVSPLPRM 289
H+ H+H H H HH H P +
Sbjct: 1378 HRRHYHHHHHHHHRRHHHHSRPEV 1401
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,675,958
Number of Sequences: 59808
Number of extensions: 226975
Number of successful extensions: 659
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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