Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0657
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    44   6e-05
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    44   6e-05
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    38   0.003
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        38   0.003
AC084159-17|AAK39364.1|  116|Caenorhabditis elegans Hypothetical...    38   0.003
Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical pr...    34   0.050
AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-li...    34   0.050
AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math ...    32   0.20 
Z46793-3|CAA86772.1|  172|Caenorhabditis elegans Hypothetical pr...    32   0.27 
Z34801-8|CAA84331.1|  172|Caenorhabditis elegans Hypothetical pr...    32   0.27 
U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin rela...    31   0.46 
Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical pr...    31   0.61 
AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C pr...    31   0.61 
Z83118-1|CAB05575.1|  975|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81552-6|CAB04489.1|  975|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina...    28   3.3  
Z92830-7|CAB07360.1|  659|Caenorhabditis elegans Hypothetical pr...    28   4.3  

>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFV 371
           EL+ ++T+  E  ++EE  EM+R+A++ GDG V YE FV
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFV 371
           EL+ ++T+  E  ++EE  EM+R+A++ GDG V YE FV
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
           E +  +      FSEEE  EM+++ +V GDG + YE FV+ +
Sbjct: 174 EFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 215


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
           E +  +      FSEEE  EM+++ +V GDG + YE FV+ +
Sbjct: 117 EFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 158


>AC084159-17|AAK39364.1|  116|Caenorhabditis elegans Hypothetical
           protein Y73B3A.12 protein.
          Length = 116

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESF 368
           EL+ ++T+  E  ++EE  EM+R+A++ GDG +   SF
Sbjct: 54  ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQIMRVSF 91


>Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical
           protein C18E9.1 protein.
          Length = 171

 Score = 34.3 bits (75), Expect = 0.050
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESLFS 386
           E +  +T   + FS++E  E++ + ++ GDG + YE F  S FS
Sbjct: 128 EFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFA-STFS 170


>AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-like
           protein protein.
          Length = 171

 Score = 34.3 bits (75), Expect = 0.050
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESLFS 386
           E +  +T   + FS++E  E++ + ++ GDG + YE F  S FS
Sbjct: 128 EFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFA-STFS 170


>AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math
           domain containingprotein 25 protein.
          Length = 364

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVE 374
           EL+ ++T+     +EEE  + +R A++ GDG V  E F++
Sbjct: 300 ELQAVMTNLQAWLTEEEIDDGIRSADISGDGLVDLEEFID 339


>Z46793-3|CAA86772.1|  172|Caenorhabditis elegans Hypothetical
           protein C56G7.1 protein.
          Length = 172

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 258 LKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
           L+ ++T+  E +SEE+  E+ RDA ++G G   Y  F   L
Sbjct: 123 LRELLTTMGERYSEEQVDELFRDAPIKG-GQFDYVEFTRML 162


>Z34801-8|CAA84331.1|  172|Caenorhabditis elegans Hypothetical
           protein C56G7.1 protein.
          Length = 172

 Score = 31.9 bits (69), Expect = 0.27
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 258 LKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
           L+ ++T+  E +SEE+  E+ RDA ++G G   Y  F   L
Sbjct: 123 LRELLTTMGERYSEEQVDELFRDAPIKG-GQFDYVEFTRML 162


>U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin related
           genes protein 3 protein.
          Length = 164

 Score = 31.1 bits (67), Expect = 0.46
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESLFS 386
           E K  + +    F E E  EM+ + +  G+G + YE FV+ +FS
Sbjct: 122 EFKLFMINMGMCFDEVEVEEMMNEVDCDGNGEIDYEEFVK-IFS 164


>Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical
           protein ZK673.7 protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
           +L+ I+ +  +  SEEE  EM+ + +  G G V ++ F+E +
Sbjct: 116 DLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157


>AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C
           protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +3

Query: 255 ELKTIVTSYAEPFSEEETREMLRDANVRGDGNVFYESFVESL 380
           +L+ I+ +  +  SEEE  EM+ + +  G G V ++ F+E +
Sbjct: 116 DLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157


>Z83118-1|CAB05575.1|  975|Caenorhabditis elegans Hypothetical
           protein F56G4.1 protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 285 EPFSEEETREMLRDANVRGDGNVFYESFVESLFSVAP 395
           EP    ET E+LR  N   +   FYE FV+ ++ +AP
Sbjct: 496 EPIWSGETDELLRRMN---ENLAFYERFVKKIYILAP 529


>Z81552-6|CAB04489.1|  975|Caenorhabditis elegans Hypothetical
           protein F56G4.1 protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 285 EPFSEEETREMLRDANVRGDGNVFYESFVESLFSVAP 395
           EP    ET E+LR  N   +   FYE FV+ ++ +AP
Sbjct: 496 EPIWSGETDELLRRMN---ENLAFYERFVKKIYILAP 529


>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
           protein K03H1.2 protein.
          Length = 1131

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 47  DAYNPLQNVSLRFNEDQLKEIGEWFENNAKPQLT 148
           D YNP   VS  F E + K   +W E   KP+LT
Sbjct: 242 DEYNPFNKVSDEFVEKREK---QWQEKTQKPRLT 272


>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
           determination protein MOG-1 protein.
          Length = 1131

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 47  DAYNPLQNVSLRFNEDQLKEIGEWFENNAKPQLT 148
           D YNP   VS  F E + K   +W E   KP+LT
Sbjct: 242 DEYNPFNKVSDEFVEKREK---QWQEKTQKPRLT 272


>Z92830-7|CAB07360.1|  659|Caenorhabditis elegans Hypothetical
           protein F11A5.8 protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 285 EPFSEEETREMLRDANVRGDGNVFYESFVESLFSVAPE-LYEI 410
           +P  + ET E+LR  N   +   FYE FV+ ++ +AP  LY +
Sbjct: 518 QPILDIETDEVLRIMN---ENLAFYERFVKKIYILAPHPLYPL 557


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,781,532
Number of Sequences: 27780
Number of extensions: 187639
Number of successful extensions: 567
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)