BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0656
(297 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M86655-1|AAA28595.1| 1165|Drosophila melanogaster GTPase-activat... 27 4.2
BT011114-1|AAR82781.1| 535|Drosophila melanogaster LD17675p pro... 27 4.2
AY051747-1|AAK93171.1| 1163|Drosophila melanogaster LD27520p pro... 27 4.2
AE014296-1762|AAN11935.1| 1163|Drosophila melanogaster CG6721-PB... 27 4.2
AE014296-1761|AAF50196.1| 1163|Drosophila melanogaster CG6721-PA... 27 4.2
BT011117-1|AAR82784.1| 1157|Drosophila melanogaster LD17186p pro... 26 7.4
AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA... 26 7.4
BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p pro... 26 9.7
AF145646-1|AAD38621.1| 418|Drosophila melanogaster BcDNA.GH0792... 26 9.7
AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB... 26 9.7
AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA... 26 9.7
>M86655-1|AAA28595.1| 1165|Drosophila melanogaster GTPase-activating
protein protein.
Length = 1165
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 145 FHSFCGRYDENSRNCE 192
F+S CGR DENS C+
Sbjct: 880 FYSCCGRSDENSPGCK 895
>BT011114-1|AAR82781.1| 535|Drosophila melanogaster LD17675p
protein.
Length = 535
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 145 FHSFCGRYDENSRNCE 192
F+S CGR DENS C+
Sbjct: 250 FYSCCGRSDENSPGCK 265
>AY051747-1|AAK93171.1| 1163|Drosophila melanogaster LD27520p
protein.
Length = 1163
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 145 FHSFCGRYDENSRNCE 192
F+S CGR DENS C+
Sbjct: 878 FYSCCGRSDENSPGCK 893
>AE014296-1762|AAN11935.1| 1163|Drosophila melanogaster CG6721-PB,
isoform B protein.
Length = 1163
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 145 FHSFCGRYDENSRNCE 192
F+S CGR DENS C+
Sbjct: 878 FYSCCGRSDENSPGCK 893
>AE014296-1761|AAF50196.1| 1163|Drosophila melanogaster CG6721-PA,
isoform A protein.
Length = 1163
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 145 FHSFCGRYDENSRNCE 192
F+S CGR DENS C+
Sbjct: 878 FYSCCGRSDENSPGCK 893
>BT011117-1|AAR82784.1| 1157|Drosophila melanogaster LD17186p
protein.
Length = 1157
Score = 26.2 bits (55), Expect = 7.4
Identities = 8/24 (33%), Positives = 18/24 (75%)
Frame = +1
Query: 172 ENSRNCEMKQMTQRKLHFLHLVRI 243
E+SR C++++M + L F+H +++
Sbjct: 678 ESSRTCDVREMARPMLGFIHRLQV 701
>AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA
protein.
Length = 3218
Score = 26.2 bits (55), Expect = 7.4
Identities = 8/24 (33%), Positives = 18/24 (75%)
Frame = +1
Query: 172 ENSRNCEMKQMTQRKLHFLHLVRI 243
E+SR C++++M + L F+H +++
Sbjct: 2739 ESSRTCDVREMARPMLGFIHRLQV 2762
>BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p
protein.
Length = 919
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 1 FLNALIY*RKKKHRCIQDEVRNK 69
F NA++Y + HRC D +RNK
Sbjct: 578 FKNAMLY---ENHRCSLDHIRNK 597
>AF145646-1|AAD38621.1| 418|Drosophila melanogaster BcDNA.GH07921
protein.
Length = 418
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 1 FLNALIY*RKKKHRCIQDEVRNK 69
F NA++Y + HRC D +RNK
Sbjct: 77 FKNAMLY---ENHRCSLDHIRNK 96
>AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB,
isoform B protein.
Length = 919
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 1 FLNALIY*RKKKHRCIQDEVRNK 69
F NA++Y + HRC D +RNK
Sbjct: 578 FKNAMLY---ENHRCSLDHIRNK 597
>AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA,
isoform A protein.
Length = 919
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 1 FLNALIY*RKKKHRCIQDEVRNK 69
F NA++Y + HRC D +RNK
Sbjct: 578 FKNAMLY---ENHRCSLDHIRNK 597
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,231,754
Number of Sequences: 53049
Number of extensions: 159974
Number of successful extensions: 307
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 527894775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -