Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0654
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0478 + 8775892-8776377 40 0.002
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 40 0.002
03_02_0485 - 8808139-8808618 39 0.003
03_02_0484 + 8805053-8805538 39 0.003
03_02_0483 - 8804021-8804485 39 0.003
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 38 0.008
01_01_0229 - 1943473-1943922 37 0.011
01_01_0231 + 1951047-1951499 37 0.014
01_01_0227 + 1933247-1933699 35 0.057
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.53
03_01_0491 + 3720842-3720958,3721904-3723109 30 1.2
07_01_1127 + 10456895-10457388,10457488-10458112 29 2.8
05_01_0396 - 3121189-3121226,3121552-3121609,3121938-3122060,312... 29 2.8
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 3.7
09_03_0036 + 11772940-11773171,11774995-11775104 29 3.7
04_01_0252 - 3329712-3331061 29 3.7
12_01_0636 + 5363436-5363848,5364041-5364354,5364792-5364817 28 6.5
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 28 6.5
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 28 6.5
06_01_0121 - 932334-933074,933189-933272,934602-935006 28 6.5
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 28 6.5
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 27 8.6
08_01_0175 - 1497700-1498459,1498546-1499939 27 8.6
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 27 8.6
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 453 SVESRLSSDGVLSVIAPRK 509
+++ + +GVL+V P++
Sbjct: 130 QIKASM-ENGVLTVTVPKE 147
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Frame = +3
Query: 249 PWSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ------HGYISRQ 410
PW ++ DK+ ++ D+ + EE+ V D +V+ G+H++++ + G+ +
Sbjct: 134 PWDVMEDDKE-VRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKER 192
Query: 411 ----FTRRYALPEGCTAESVESRLSSDGVLSVIAPR 506
+ R ALP+ C V + L +GVL V P+
Sbjct: 193 SVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPK 227
>03_02_0485 - 8808139-8808618
Length = 159
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 453 SVESRLSSDGVLSVIAPRK 509
+++ + +GVL+V P++
Sbjct: 128 QIKASM-ENGVLTVTVPKE 145
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 453 SVESRLSSDGVLSVIAPRK 509
+++ + +GVL+V P++
Sbjct: 130 QIKASM-ENGVLTVTVPKE 147
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 453 SVESRLSSDGVLSVIAPRK 509
+++ + +GVL+V P++
Sbjct: 123 QIKASM-ENGVLTVTVPKE 140
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 453 SVESRLSSDGVLSVIAPR 506
V++ L +GVL+V P+
Sbjct: 119 QVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 453 SVESRLSSDGVLSVIAPR 506
V++ + +GVL+V P+
Sbjct: 118 QVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 297 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 452
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 453 SVESRLSSDGVLSVIAPR 506
V++ + +GVL+V P+
Sbjct: 119 QVKAGM-ENGVLTVTVPK 135
>01_01_0227 + 1933247-1933699
Length = 150
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 357 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRK 509
V+GK++E+ S +F RR+ LP G + V + + +GVL+V P++
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 372 RVCLQPRCSRPPF*QRFLPGRNAGR 298
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 258 WTKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 103
W+ + +G KV A G GC K+F S+ +A+ H A +L F+
Sbjct: 379 WSLIGIKGDKV-------GADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 372 RVCLQPRCSRPPF*QRFLPGRNAGR 298
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>05_01_0396 -
3121189-3121226,3121552-3121609,3121938-3122060,
3122170-3122323,3122590-3122678,3123185-3123410,
3123575-3123760,3123859-3123914,3124381-3124464,
3124547-3124627,3124773-3125045,3125143-3125263,
3126094-3126230,3126406-3126697,3127401-3127585
Length = 700
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 148 LGLTPEDFLSAAAGPLVSREYYRPWRHLAAAARDLGPAS 264
LG T + L AA+ P +R RP AAA D+GPAS
Sbjct: 10 LGFTGDFVLDAASSPSATRRR-RPVPPEAAAGGDVGPAS 47
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 319 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 414
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 317 GRNLC*NGGRLHRG*RQTRGEERSAWLH 400
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 372 RVCLQPRCSRPPF*QRFLPGRNAGR 298
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>12_01_0636 + 5363436-5363848,5364041-5364354,5364792-5364817
Length = 250
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 193 LVSREYYRPWRHLAAAARDLGPA 261
+V ++ PW+H+AAA GPA
Sbjct: 129 VVDEDHLLPWQHIAAAVTSGGPA 151
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 264 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 437
+SDKDK N+D + A E + V+ E K +EK + H Y + R L E
Sbjct: 502 ESDKDKIMCNVDEKDIA-EHLRVRLKKEQEEKEHKKKEKAEAHLYTIIKVARDENLKE 558
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 417 RRYALPEGCTAESVESRLSSDGVLSV-IAPRKCRQQWRVNARFRSP 551
RR ALP G E+ ESR S V S I+PR R + R R R P
Sbjct: 105 RRKALPNGSDPENEESRSSKMAVRSANISPRG-RGRGRGRGRGRPP 149
>06_01_0121 - 932334-933074,933189-933272,934602-935006
Length = 409
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 568 AHGSGLGDRNLAFTLHCWRHFLGAITDNTPSED--SRDSTDSAV 443
A G G R FT HCW + + + + E S+D+T++AV
Sbjct: 333 ARGVSAGRRGHNFTFHCWPVSISSYYEVSGGEASCSQDTTEAAV 376
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 552 WAIGILRSPSTAGGTSWVRLQTTHHLKTAGTPQIQPYSP 436
W++ L SP TA G W R H G P + P
Sbjct: 321 WSVPELPSPPTASGLHWQRHPAATHGGGGGGPDTTAFVP 359
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 264 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 437
+SDKDK N+D + A E + ++ E K +EK + H Y + R L E
Sbjct: 488 ESDKDKIMCNVDEKDIA-EHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKE 544
>08_01_0175 - 1497700-1498459,1498546-1499939
Length = 717
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 537 LRSPSTAGGTSWVRLQTTHHLKTAGTPQIQPYSPPAK 427
L+ + G W+ + T +L + GT YSPP +
Sbjct: 41 LQGSAAIAGDGWIEITTGSNLPSGGTMGRVAYSPPVQ 77
>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
Length = 711
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 360 EGKHEEKK--DQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRKCRQQWRVN 533
+G+H K D H + R+ +R + G LSVI RK W
Sbjct: 519 DGQHLTKDVPDSHNFPHRKNSRDSSKANGSVEPEASLDFEGPKPLSVILQRKREAAWANG 578
Query: 534 ARFRSPKPDPCAK 572
SPK D A+
Sbjct: 579 TSACSPKQDKSAE 591
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,409,010
Number of Sequences: 37544
Number of extensions: 440375
Number of successful extensions: 1300
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -