Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0652
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031...    33   0.22 
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255...    32   0.38 
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071...    32   0.50 
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746...    29   2.7  
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408...    29   4.7  
04_04_0699 - 27345243-27346199                                         29   4.7  
04_04_0122 - 22918146-22918220,22918455-22918496,22918586-229186...    29   4.7  
12_01_0109 + 853043-853426,853653-853787,853866-854138                 28   6.2  
09_06_0262 - 21921647-21922796,21922897-21923423                       28   8.2  
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948     28   8.2  

>05_06_0234 -
           26602660-26602728,26602814-26602988,26603077-26603120,
           26603204-26603381,26603468-26603652,26603737-26603801,
           26603985-26604066,26604342-26604434,26605096-26605191,
           26605312-26605355,26605467-26605530
          Length = 364

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 520 KGIPDFWYNIFRNVSMLSEMMQE 588
           KG+P+FW N  +N  +LSE +QE
Sbjct: 129 KGVPEFWLNAMKNHEILSEEIQE 151


>06_01_0356 +
           2557127-2557193,2557272-2557315,2557433-2557528,
           2559259-2559351,2559450-2559540,2559617-2559678,
           2559754-2559938,2560022-2560199,2560293-2560336,
           2560440-2560635,2560728-2560745,2560955-2561005
          Length = 374

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 508 DPNVKGIPDFWYNIFRNVSMLSEMMQE 588
           D + KG+PDFW    +   +LSE +QE
Sbjct: 128 DADAKGVPDFWLTAMKTNEVLSEEIQE 154


>06_03_0740 -
           24006485-24006629,24006821-24006864,24006954-24007122,
           24007226-24007413,24007572-24007634,24007992-24008084,
           24009837-24009932,24010024-24010067,24010184-24010357,
           24010764-24010974
          Length = 408

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 520 KGIPDFWYNIFRNVSMLSEMMQET 591
           KG+PDFW N  +N  +L+E + E+
Sbjct: 208 KGVPDFWLNAMKNNEILAEEIHES 231


>01_06_0465 -
           29573972-29574110,29574300-29574343,29574434-29574602,
           29574707-29574894,29575081-29575145,29575257-29575311,
           29575502-29575594,29576035-29576130,29576259-29576302,
           29576419-29576431
          Length = 301

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 520 KGIPDFWYNIFRNVSMLSEMMQET 591
           KG+PDFW    +N  +L+E + E+
Sbjct: 103 KGVPDFWLKAMKNNEILAEEIHES 126


>07_03_1756 -
           29239137-29239325,29239741-29240259,29240693-29240800,
           29240856-29241155,29241730-29241831,29243042-29243209,
           29243878-29243991,29244184-29244288,29244372-29244502,
           29244794-29244918,29245001-29245172,29245277-29245316,
           29245636-29245722,29245803-29245868,29246412-29246510,
           29246714-29246836,29247066-29247107,29247195-29247260,
           29247362-29247553,29247672-29247737,29248839-29249141
          Length = 1038

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 350 ALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGE 472
           A IV  + EPN  +  N  +D+T E+    A +NAA+T  +
Sbjct: 685 AAIVTASEEPNGGDSANKLKDETMEDP---ATENAAMTNAD 722


>04_04_0699 - 27345243-27346199
          Length = 318

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -3

Query: 318 SYLHSSACTSL*NLASMSTNSSEEFSRRGFADEHSGVGMPSLLHEGDL*WPLSFHY 151
           S+  SS+CT+    +S S++ S +  +RG A   S + MP +     L WP+   Y
Sbjct: 244 SFSSSSSCTTTTTSSSTSSSGSPKRRKRGEAAAAS-MSMPLVPPPSQLNWPVQAWY 298


>04_04_0122 -
           22918146-22918220,22918455-22918496,22918586-22918642,
           22918784-22918844,22919219-22919280,22919372-22919485,
           22919565-22919636,22919824-22919874,22919990-22920112,
           22921261-22921383
          Length = 259

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 517 VKGIPDFWYNIFRNVSMLSEMMQE 588
           +K IPDFW   F +  ML E++ E
Sbjct: 72  IKQIPDFWLTAFLSHPMLGELLTE 95


>12_01_0109 + 853043-853426,853653-853787,853866-854138
          Length = 263

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 207 GMPSLLHEGDL*WPLSFHYGSRHFSTGVALVHHFXXXXXXLQTP 76
           G+P L   GD+ + L+F  G+ H  T VAL   F       Q+P
Sbjct: 129 GVPDLSEHGDV-YDLTFGLGADHPPTAVALRKEFQRIILYQQSP 171


>09_06_0262 - 21921647-21922796,21922897-21923423
          Length = 558

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +2

Query: 392 CLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMIPM*R 523
           CL+PW D    E     V +AA   GE   D +  E  M  + R
Sbjct: 300 CLSPWSDHRSSEYYNCNVYDAAKANGEASDDKRRREQGMASLDR 343


>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
          Length = 508

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -2

Query: 415 VITPWVETFIIIRFICAIHNKSSLFIKRLVKFFIFAFECMYFTVKLGLNVD 263
           V+ PW+++F I   +  +H+K +L  K  +K    A + +   +K G+ +D
Sbjct: 459 VLPPWLDSFPIPNAVLCLHSKINLSGKNNMKNETLA-DILVINIKTGILMD 508


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,154,530
Number of Sequences: 37544
Number of extensions: 349571
Number of successful extensions: 864
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)