Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0649
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 418 WCIFREGFGREHHQGFP 468
           W I+R G GR   +  P
Sbjct: 31  WAIYRPGIGRYAQEDLP 47


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 568 YCPVTSFGIVEERF 527
           YCP+ + GI++ +F
Sbjct: 161 YCPIVTTGIIKIQF 174


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 96  YLKICYIKIVH*NCSDNHEVSR 161
           + K+C +KIV     D  E++R
Sbjct: 364 FFKLCGMKIVKKRRKDKREITR 385


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 278 LEAGHEVTWVTPYPPSELAKGLKIVDVS 361
           LE  H +    P PP  L     I+D+S
Sbjct: 257 LETFHTLEKCRPDPPQNLVINESIIDLS 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,385
Number of Sequences: 336
Number of extensions: 2565
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)