Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0649
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.5  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   9.9  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   9.9  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   9.9  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   9.9  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   9.9  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   9.9  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 155 VSDCFSSWCAW*RRRVRTTC 214
           + DC   +C+W +R   T C
Sbjct: 792 LQDCIEIFCSWCKRNGLTIC 811


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 565 CPVTSFGIVEERFRDDRVVF 506
           C V + GI E RF+ D+V F
Sbjct: 189 CRVLTSGIFETRFQVDKVNF 208


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -3

Query: 323 SEDTESPRSPRDQPQATRRLSLCEGVVVREGIGNTQSTWYARADVTTHTKKKSSPRHLMI 144
           S   E P+      +A RRL   + +   EG GN + T      ++        PR L I
Sbjct: 4   STPVEQPKGIEVVKEAIRRLQFTQQMKKAEGGGNVK-TKKVEITISVDGVAIQEPRSLTI 62

Query: 143 V*TISVHYLN 114
           +    +H ++
Sbjct: 63  MHQFPLHKIS 72


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -3

Query: 323 SEDTESPRSPRDQPQATRRLSLCEGVVVREGIGNTQSTWYARADVTTHTKKKSSPRHLMI 144
           S   E P+      +A RRL   + +   EG GN + T      ++        PR L I
Sbjct: 4   STPVEQPKGIEVVKEAIRRLQFTQQMKKAEGGGNVK-TKKVEITISVDGVAIQEPRSLTI 62

Query: 143 V*TISVHYLN 114
           +    +H ++
Sbjct: 63  MHQFPLHKIS 72


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -3

Query: 323 SEDTESPRSPRDQPQATRRLSLCEGVVVREGIGNTQSTWYARADVTTHTKKKSSPRHLMI 144
           S   E P+      +A RRL   + +   EG GN + T      ++        PR L I
Sbjct: 4   STPVEQPKGIEVVKEAIRRLQFTQQMKKAEGGGNVK-TKKVEITISVDGVAIQEPRSLTI 62

Query: 143 V*TISVHYLN 114
           +    +H ++
Sbjct: 63  MHQFPLHKIS 72


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -3

Query: 323 SEDTESPRSPRDQPQATRRLSLCEGVVVREGIGNTQSTWYARADVTTHTKKKSSPRHLMI 144
           S   E P+      +A RRL   + +   EG GN + T      ++        PR L I
Sbjct: 4   STPVEQPKGIEVVKEAIRRLQFTQQMKKAEGGGNVK-TKKVEITISVDGVAIQEPRSLTI 62

Query: 143 V*TISVHYLN 114
           +    +H ++
Sbjct: 63  MHQFPLHKIS 72


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -3

Query: 323 SEDTESPRSPRDQPQATRRLSLCEGVVVREGIGNTQSTWYARADVTTHTKKKSSPRHLMI 144
           S   E P+      +A RRL   + +   EG GN + T      ++        PR L I
Sbjct: 4   STPVEQPKGIEVVKEAIRRLQFTQQMKKAEGGGNVK-TKKVEITISVDGVAIQEPRSLTI 62

Query: 143 V*TISVHYLN 114
           +    +H ++
Sbjct: 63  MHQFPLHKIS 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,082
Number of Sequences: 2352
Number of extensions: 10857
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)