Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0648
         (598 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56046| Best HMM Match : No HMM Matches (HMM E-Value=.)              85   3e-17

>SB_56046| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 674

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 39/81 (48%), Positives = 53/81 (65%)
 Frame = +3

Query: 267 TQEXQLXFCQISFXRYXDDXNRYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPTVGLA 446
           +QE Q         R  +D  +Y+ L    +RN  LFF +L    E+ MPIVYTPTVGLA
Sbjct: 97  SQEIQAQRVYRELQRKPNDLEKYIQLMALLERNESLFFRVLFDYTEELMPIVYTPTVGLA 156

Query: 447 CQXFGLVYRRPRGLYITIHDK 509
           C+ +G+++RRPRGL+I+IHDK
Sbjct: 157 CRKYGMIFRRPRGLFISIHDK 177



 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +2

Query: 158 LRGIDHIKDXXXNKGLAFTLEELKL 232
           +RG D ++D   NKGLAFTLEE ++
Sbjct: 60  IRGTDIMRDSHLNKGLAFTLEERQI 84


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,182,878
Number of Sequences: 59808
Number of extensions: 202205
Number of successful extensions: 236
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)