Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0648
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19900.1 68415.m02326 malate oxidoreductase, putative similar...    85   4e-17
At5g25880.1 68418.m03071 malate oxidoreductase, putative similar...    82   2e-16
At5g11670.1 68418.m01364 malate oxidoreductase, putative similar...    81   7e-16
At1g79750.1 68414.m09304 malate oxidoreductase, putative similar...    73   2e-13
At4g00570.1 68417.m00080 malate oxidoreductase, putative similar...    66   2e-11
At2g13560.1 68415.m01495 malate oxidoreductase, putative similar...    65   4e-11
At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl methyl...    29   3.1  

>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
           NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
           (SP:P51615) {Vitis vinifera}
          Length = 581

 Score = 84.6 bits (200), Expect = 4e-17
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = +3

Query: 309 RYXDDXNRYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPTVGLACQXFGLVYRRPRGL 488
           +Y     +Y+ LTE Q+RN +LF+ LL   +E+ +PIVYTPTVG ACQ FG ++RRP+GL
Sbjct: 91  QYQFPLQKYMALTELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGL 150

Query: 489 YITIHDKXTYLIF*RTGPE 545
           +I++ DK   L   +  PE
Sbjct: 151 FISLKDKGKILDVLKNWPE 169


>At5g25880.1 68418.m03071 malate oxidoreductase, putative similar to
           NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
           (SP:P12628) {Phaseolus vulgaris}
          Length = 588

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 38/97 (39%), Positives = 59/97 (60%)
 Frame = +3

Query: 255 PKFKTQEXQLXFCQISFXRYXDDXNRYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPT 434
           P   +Q+ Q      +  +Y     RY+ L + Q+RN +LF+ LL   +E+ +P+VYTPT
Sbjct: 80  PVVLSQDVQERKVMHNLRQYTVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPT 139

Query: 435 VGLACQXFGLVYRRPRGLYITIHDKXTYLIF*RTGPE 545
           VG ACQ +G +YRRP+GLYI++ +K   L   +  P+
Sbjct: 140 VGEACQKYGSIYRRPQGLYISLKEKGKILEVLKNWPQ 176


>At5g11670.1 68418.m01364 malate oxidoreductase, putative similar to
           NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
           (SP|P12628) {Phaseolus vulgaris}
          Length = 588

 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 36/97 (37%), Positives = 60/97 (61%)
 Frame = +3

Query: 255 PKFKTQEXQLXFCQISFXRYXDDXNRYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPT 434
           P   +Q+ Q      +  +Y     RY+ L + Q+RN +LF+ LL   +E+ +P+VYTPT
Sbjct: 80  PVILSQDVQERKVMHNLRQYTVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPT 139

Query: 435 VGLACQXFGLVYRRPRGLYITIHDKXTYLIF*RTGPE 545
           VG ACQ +G ++R+P+GLYI++++K   L   +  P+
Sbjct: 140 VGEACQKYGSIFRKPQGLYISLNEKGKILEVLKNWPQ 176


>At1g79750.1 68414.m09304 malate oxidoreductase, putative similar to
           malate oxidoreductase (NADP-dependent malic enzyme)
           GB:P34105 (Populus balsamifera subsp. trichocarpa)
          Length = 646

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 32/97 (32%), Positives = 57/97 (58%)
 Frame = +3

Query: 255 PKFKTQEXQLXFCQISFXRYXDDXNRYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPT 434
           P   +Q+ Q+     +  +Y     +Y+ + + Q+ N +LF+ LL   +E+ +P++YTPT
Sbjct: 138 PTVISQDLQVKKIMHTLRQYQVPLQKYMAMMDLQETNERLFYKLLIDHVEELLPVIYTPT 197

Query: 435 VGLACQXFGLVYRRPRGLYITIHDKXTYLIF*RTGPE 545
           VG ACQ +G ++ RP+GL+I++ +K       R  PE
Sbjct: 198 VGEACQKYGSIFLRPQGLFISLKEKGKIHEVLRNWPE 234


>At4g00570.1 68417.m00080 malate oxidoreductase, putative similar to
           NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
           precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum
           tuberosum}
          Length = 607

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = +3

Query: 330 RYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPTVGLACQXFGLVYRRPRGLYITIHDK 509
           ++  L    DRN  L++ +L   I+ F PI+YTPTVGL CQ +  +YRRPRG+Y +  DK
Sbjct: 105 KWRMLNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYRRPRGMYFSAKDK 164


>At2g13560.1 68415.m01495 malate oxidoreductase, putative similar to
           NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum
           tuberosum}
          Length = 623

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = +3

Query: 330 RYLYLTEXQDRNXKLFFSLLDCXIEKFMPIVYTPTVGLACQXFGLVYRRPRGLYITIHDK 509
           ++  L    DRN  +++ +L   IE++ PIVYTPTVGL CQ +  ++RRPRG+Y +  D+
Sbjct: 112 KWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDR 171


>At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl
           methyltransferase family protein similar to SAM:jasmonic
           acid carboxyl methyltransferase (JMT)[GI:13676829] and
           to SAM:salicylic acid carboxyl methyltransferase
           (SAMT)[GI:6002712][Clarkia breweri]
          Length = 371

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 465 VYRRPRGLYITIHDKXTYLIF*RTGPEHAXRGNSFY 572
           ++ R R   +    +   +I  R GP+H  RGNSF+
Sbjct: 208 IFLRCRSKEMVSAGRMVLIILGREGPDHVDRGNSFF 243


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,380,976
Number of Sequences: 28952
Number of extensions: 146001
Number of successful extensions: 206
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)