Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0647
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep: ...   181   1e-44
UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca sext...   114   1e-24
UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY0007...    35   1.8  
UniRef50_Q9WZU6 Cluster: Response regulator; n=2; Thermotoga|Rep...    33   5.6  
UniRef50_A5KHH8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  

>UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep:
           Cationic peptide CP8 - Bombyx mandarina (Wild silk moth)
           (Wild silkworm)
          Length = 89

 Score =  181 bits (440), Expect = 1e-44
 Identities = 78/84 (92%), Positives = 78/84 (92%)
 Frame = +1

Query: 1   MRCVXAYGALVCGTDYCEKNPCIQPPLVCPXNTEHRXRHAGKXACCPACVTLLGEGATCK 180
           MRC  AYGALVCGTDYCEKNPCIQPPLVCP NTEHR RHAGK ACCPACVTLL EGATCK
Sbjct: 1   MRCAAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLDEGATCK 60

Query: 181 IYSKELGETPSAVCKEPLKCIKRV 252
           IYSKELGETPSAVCKEPLKCIKRV
Sbjct: 61  IYSKELGETPSAVCKEPLKCIKRV 84


>UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca
           sexta|Rep: Cationic peptide CP8 - Manduca sexta (Tobacco
           hawkmoth) (Tobacco hornworm)
          Length = 105

 Score =  114 bits (275), Expect = 1e-24
 Identities = 48/80 (60%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
 Frame = +1

Query: 19  YGALVCGTDYCEKNPCIQP--PLVCPXNTEHRXRHAGKXACCPACVTLLGEGATCKIYSK 192
           YG LVCG++YC+++PC  P     C   + +R +HAGK ACCPACVT+LGE A CK YSK
Sbjct: 18  YGDLVCGSNYCKQHPCGSPIAQSSCRSPSVYRAKHAGKCACCPACVTMLGENAACKTYSK 77

Query: 193 ELGETPSAVCKEPLKCIKRV 252
           ELGETPSA+C++PLKC+  V
Sbjct: 78  ELGETPSAICRDPLKCLNGV 97


>UniRef50_Q7RTC3 Cluster: Putative uncharacterized protein PY00071;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00071 - Plasmodium yoelii yoelii
          Length = 2736

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 22/93 (23%), Positives = 43/93 (46%)
 Frame = -3

Query: 593 LLPISHF**ICLTLVSKFAQLLETYENIKLYSNEVTYIVPIS*QGYLYNTYYFISFLFGL 414
           +LP++    +    ++ +   L+ YE  KL   E+ YI+ IS +  L+   ++      +
Sbjct: 537 ILPLNFCLDLLYIFLNNYEHFLDNYEFFKLLKFEIAYIILISLKSNLHIDIFYRCLKIFI 596

Query: 413 LKIHIF*FQISIFTTVHIIINFIPYTNYISNRS 315
           +  H + FQ  +     ++IN I Y +   N S
Sbjct: 597 IICHKY-FQYFLGEIKFLLINLIQYLSLTKNFS 628


>UniRef50_Q9WZU6 Cluster: Response regulator; n=2; Thermotoga|Rep:
           Response regulator - Thermotoga maritima
          Length = 253

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 563 CLTLVSKFAQLLETYENIKLYSNEVTYIVPIS*QGYLY 450
           C+  V KF  ++  YE IK +  E  Y++PIS   YL+
Sbjct: 159 CVMYV-KFEDIMRDYETIKKFFRETDYVLPISASEYLF 195


>UniRef50_A5KHH8 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter jejuni subsp. jejuni CG8486|Rep: Putative
           uncharacterized protein - Campylobacter jejuni subsp.
           jejuni CG8486
          Length = 101

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -2

Query: 618 GNVTLNF-FFITNKSFLINLSNPSLQICTIIRDL*EYKIILERSYIHCPDILTGLPV*YI 442
           G V +NF FF    SF++ L N S +   +I+    +KIIL  S +   ++  G  V  +
Sbjct: 40  GLVCINFSFFSCILSFILKLLNKSFKFFRLIKSKYIFKIILNSSMLKLKNLFLGNSV-TL 98

Query: 441 LFH 433
           LFH
Sbjct: 99  LFH 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,456,550
Number of Sequences: 1657284
Number of extensions: 11239755
Number of successful extensions: 24146
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24139
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)