Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0644
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep: ...   174   1e-42
UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca sext...   113   5e-24
UniRef50_A0ED71 Cluster: Chromosome undetermined scaffold_9, who...    33   7.9  

>UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep:
           Cationic peptide CP8 - Bombyx mandarina (Wild silk moth)
           (Wild silkworm)
          Length = 89

 Score =  174 bits (424), Expect = 1e-42
 Identities = 76/84 (90%), Positives = 76/84 (90%)
 Frame = +1

Query: 1   MRCVXAYGALVCGTDYCEKNPCIQXPLVCXXNTEHRXRHAGKXACCPACVTLLGEGATCK 180
           MRC  AYGALVCGTDYCEKNPCIQ PLVC  NTEHR RHAGK ACCPACVTLL EGATCK
Sbjct: 1   MRCAAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLDEGATCK 60

Query: 181 IYSKELGETPSAVCKEPLKCIKRV 252
           IYSKELGETPSAVCKEPLKCIKRV
Sbjct: 61  IYSKELGETPSAVCKEPLKCIKRV 84


>UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca
           sexta|Rep: Cationic peptide CP8 - Manduca sexta (Tobacco
           hawkmoth) (Tobacco hornworm)
          Length = 105

 Score =  113 bits (271), Expect = 5e-24
 Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
 Frame = +1

Query: 19  YGALVCGTDYCEKNPCIQXPLV---CXXNTEHRXRHAGKXACCPACVTLLGEGATCKIYS 189
           YG LVCG++YC+++PC   P+    C   + +R +HAGK ACCPACVT+LGE A CK YS
Sbjct: 18  YGDLVCGSNYCKQHPC-GSPIAQSSCRSPSVYRAKHAGKCACCPACVTMLGENAACKTYS 76

Query: 190 KELGETPSAVCKEPLKCIKRV 252
           KELGETPSA+C++PLKC+  V
Sbjct: 77  KELGETPSAICRDPLKCLNGV 97


>UniRef50_A0ED71 Cluster: Chromosome undetermined scaffold_9, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_9, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 3059

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = -2

Query: 506  NYTRRVTYIVPIS*QGYLYNTYYFISFLFGLLKIHIF*FQISIFTTVHIIINFIPYTNYI 327
            NYT+R TYI+ I    Y Y    +ISFL   + + +   Q+ IF  +H  I  I   N I
Sbjct: 3000 NYTKRFTYII-IQVSVYFYQ---YISFLCQFIIVKVTTLQLVIFDAMHYSIARIKIENRI 3055


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,075,409
Number of Sequences: 1657284
Number of extensions: 10936764
Number of successful extensions: 21498
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21487
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)