Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0644
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.61
SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.3
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 29 3.3
SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29) 28 7.5
SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_47173| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_44915| Best HMM Match : VWA (HMM E-Value=0) 27 9.9
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 9.9
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 31.5 bits (68), Expect = 0.61
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +1
Query: 25 ALVCGTD-YCEKNPCIQXPLVCXXNTEHRXRHAGKXACCPACVTLLGEGATCKIYSKELG 201
A VCGTD + CI C R +HAG+ C P + G C + G
Sbjct: 372 APVCGTDDRTYPSECIMKTSACADKKAVRVKHAGE--CGPCGTLVCTNGKNC--VTSHQG 427
Query: 202 ETPSAVCKEP 231
T AVC P
Sbjct: 428 LTRQAVCACP 437
>SB_34870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 11 SXRTVLWYVVQTTVKKIHAYSXHLFALXTLSIAPD 115
S R VLW V + ++ + A+S LF+L + + PD
Sbjct: 172 SERRVLWDVASSKIRAVTAFSNSLFSLNSNAFCPD 206
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Frame = +1
Query: 31 VCGTD-YCEKNPCIQXPLVCXXNTEHRXRHAGKXA-----CCPAC 147
VCG+D NPC+ VC N + R +H G C P C
Sbjct: 129 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 173
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +1
Query: 31 VCGTDYCE-KNPCIQXPLVCXXNTEHRXRHAGKXACCPACVTLLGEGA-TCKIYSKE--L 198
VCG+D NPC+ C N +H GK +C +G CK+ +
Sbjct: 180 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKMIGNKPRC 239
Query: 199 GETPSAVCKEPLKC 240
P C E ++C
Sbjct: 240 MRPPQTDCSE-VRC 252
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +1
Query: 31 VCGTDYCE-KNPCIQXPLVCXXNTEHRXRHAGKXACCPACVTLLGEGA-TCKIYSKELGE 204
VCG+D NPC+ C N +H GK +C +G CK+ +G
Sbjct: 37 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKM----IGN 92
Query: 205 TPSAVCKEPLKCIK 246
P + C K
Sbjct: 93 KPRCMRPPQTACSK 106
>SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 184 KSCKLHLHQVKLH-KRDNKXTFQRVWXDAQC 95
K+ K H+ VK H KR N TF ++ QC
Sbjct: 27 KTVKFHVFSVKFHEKRSNSTTFGQIPPSRQC 57
>SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29)
Length = 1167
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 444 CIIQVTLSGYRDNVCNSSSIIIYSHKSLIIVQIWRLGLDKFIKNDLLV--XKTKFKVT 611
C + +LSG R VC + I++Y H + R LD +N++ + K+ FK T
Sbjct: 557 CKLMESLSGLRGVVCVADDILVYGHSEGDHDEKLRNLLDVCARNNIKLNHQKSVFKTT 614
>SB_36366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 366 HCSKYRNLKLKNMN 407
HCSKYRN+K K +N
Sbjct: 264 HCSKYRNIKQKYIN 277
>SB_47173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = -2
Query: 290 FSC**KRLHKLSQTLLMHLRGSLHTAEGVSPSSFE*ILQVAPSPSKVTQAGQQAXFPACL 111
F C LHK+ +T L SL T +G LQV P V+ G ++ C
Sbjct: 148 FLCPTNILHKIGRTYLSTTHDSLQTTQGALELR---PLQVFTLPCNVSFQGMKSGITDCS 204
Query: 110 XRCSVXL 90
R V L
Sbjct: 205 ERLDVHL 211
>SB_44915| Best HMM Match : VWA (HMM E-Value=0)
Length = 541
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 148 VTLLGE-GATCKIYSKELGETPSAVCKEPLKCIKRV*LSLC 267
+T GE G CK ++ E S+ C+ CIK+V C
Sbjct: 24 ITPAGERGMCCKAIKLDVDECSSSPCQNGASCIKKVGRYFC 64
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 121 GKXACCPACVTLLGEGATCKIYSKELGETPSAVCKEPLKC 240
G CC C + G CK+ K T C E KC
Sbjct: 546 GSLCCCTECARVCHRGHDCKL--KRTSPTAYCDCWEKCKC 583
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,239
Number of Sequences: 59808
Number of extensions: 360670
Number of successful extensions: 625
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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