Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0643
         (379 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.44 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.3  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   1.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   4.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   7.2  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    20   9.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 237 DSPRXVLSSGRLVIVHVDALQLEVG 163
           D+P  +    R++I HVDA  L+ G
Sbjct: 486 DTPDLISDGYRVIISHVDAWYLDCG 510


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 91  FDCRIDRPVCVQFP 50
           FD  I  P+CVQ P
Sbjct: 319 FDKMIGNPICVQIP 332


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 126 LIGYNFPELSSNLIAALTGLYVYNFPHF 43
           L  Y+   ++  ++    GLYV N  HF
Sbjct: 321 LENYSLQLINHRVVFTAMGLYVLNMEHF 348


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
          protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 78 LTGLYVYNFPHFKWNKNT 25
          L  LY++ F H+ W+++T
Sbjct: 5  LIPLYLFLFVHYGWSEDT 22


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 85   NQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 207
            N+I  + W V  D  G      YHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 179 SSWRSESP*YVPVGSMPCSSDITSQNL 99
           SSW    P   PVG    +S +  Q L
Sbjct: 35  SSWPGRPPKRAPVGLSLAASHLQQQQL 61


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 162 VSVIRSRRIDAMLIGYNFPELSSNLI 85
           V ++RSR +DA     NF + +S ++
Sbjct: 220 VMILRSRFLDARRKRRNFSKQASEIL 245


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
          protein 7 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 45 NEGNCTHTGRSMRQS 89
          +EG CT  GR ++++
Sbjct: 51 DEGPCTSEGRELKKT 65


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 56  LYTYRPVNAAIKLELSSGKLYPMSMASIRRERIT 157
           ++TY P N    L L++  L P++  +  +  +T
Sbjct: 190 IFTYMPYNIVFGLCLTTFGLLPVNGVTSEKCNLT 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,502
Number of Sequences: 336
Number of extensions: 2037
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)