Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0643
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 155 1e-38
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 155 1e-38
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 153 3e-38
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 150 3e-37
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 150 3e-37
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 148 2e-36
03_01_0034 + 318432-318825,318902-319851 146 7e-36
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 144 2e-35
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 79 2e-15
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 73 8e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 72 2e-13
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 65 2e-11
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 42 1e-04
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 32 0.13
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 32 0.17
10_01_0300 - 3257584-3258825 31 0.40
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 31 0.40
08_02_0187 - 13978194-13979093,13980332-13980679 30 0.69
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 29 1.6
07_01_1081 + 9831606-9832499 28 2.1
01_05_0507 - 22800124-22800163,22800411-22800554,22801291-228018... 28 2.1
02_04_0648 - 24716249-24717841 28 2.8
03_06_0645 - 35257045-35257113,35257332-35257394,35257486-352576... 27 3.7
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 4.9
08_02_0843 - 21759183-21759556,21760255-21762913 27 6.5
07_01_0914 - 7693305-7693513,7693613-7694111,7694716-7696316,769... 27 6.5
06_03_0865 - 25516072-25517007 27 6.5
04_04_0701 + 27373057-27374013 27 6.5
01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848 27 6.5
09_02_0051 - 3606453-3606473,3606562-3606957,3608250-3608419,360... 26 8.6
04_03_0295 - 14033864-14033977,14034485-14034520 26 8.6
01_06_0482 - 29672720-29673854,29673941-29676267 26 8.6
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 155 bits (376), Expect = 1e-38
Identities = 73/111 (65%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 155 bits (375), Expect = 1e-38
Identities = 72/111 (64%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI DEHG+D TG Y GDSDLQLERINVYYNEA+GG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 153 bits (372), Expect = 3e-38
Identities = 72/111 (64%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+GG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 150 bits (364), Expect = 3e-37
Identities = 69/112 (61%), Positives = 79/112 (70%)
Frame = +1
Query: 43 KMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKY 222
KMREI+HIQ GQCGNQIG+KFWEV+ DEHGIDPTG Y G SDLQLER+NVYYNEA+ G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 223 VPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
VPRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 291
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 150 bits (364), Expect = 3e-37
Identities = 69/111 (62%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ DEHGIDPTG Y G+SDLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 148 bits (358), Expect = 2e-36
Identities = 68/111 (61%), Positives = 78/111 (70%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV+ DEHGIDPTG Y G SDLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 146 bits (353), Expect = 7e-36
Identities = 68/111 (61%), Positives = 76/111 (68%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y GDSDLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 144 bits (350), Expect = 2e-35
Identities = 68/111 (61%), Positives = 76/111 (68%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI EHG+DPTGTY G S QLERINVY+NEA+GG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 78.6 bits (185), Expect = 2e-15
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI+P GT D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRAI VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 72.9 bits (171), Expect = 8e-14
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQW-TLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + D+ +S G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLIS-GKEDAANNFARGHYTIGKE 113
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 71.7 bits (168), Expect = 2e-13
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+LVDLEP
Sbjct: 63 RALLVDLEP 71
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 65.3 bits (152), Expect = 2e-11
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKE 113
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS 165
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 178 ERINVYYNEATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKG 357
+ N +++E + GK+VPRA+ VDLEP + L A +A+G
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARG 166
Query: 358 HYTEGAE 378
HYT G E
Sbjct: 167 HYTVGRE 173
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 82 GNQIGAKFWEVISDEHG--IDPTGTYHGDSDLQLERIN 189
G+Q +KFW+ + +E G ++ + YH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 31.9 bits (69), Expect = 0.17
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 82 GNQIGAKFWEVISDEHG--IDPTGTYHGDSDLQLERIN 189
G+Q +KFW+ + +E G ++ + YH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>10_01_0300 - 3257584-3258825
Length = 413
Score = 30.7 bits (66), Expect = 0.40
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 82 GNQIGAKFWEVISDEHG--IDPTGTYHGDSDLQLERIN 189
G+Q + FW+ + +E G ++ + YH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 30.7 bits (66), Expect = 0.40
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 82 GNQIGAKFWEVISDEHG--IDPTGTYHGDSDLQLERIN 189
G+Q + FW+ + +E G ++ + TYH +D Q ER+N
Sbjct: 875 GSQFTSHFWKKLQEELGTRLNFSTTYHPQADGQTERLN 912
>08_02_0187 - 13978194-13979093,13980332-13980679
Length = 415
Score = 29.9 bits (64), Expect = 0.69
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 271 TESIVPAPGPQG*PEXRTFLRSPRYSTR*CAPAGGRSLRDT 149
TE + PAP P+G P+ +T + P ++ AP+ S D+
Sbjct: 338 TEDLAPAPAPEG-PKKKTKKKKPSTTSAAAAPSDDSSAADS 377
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEV------ISDEHGIDPTGTYHG-DSDLQLERINVYYNE 204
MRE V +Q G N +G+ FW ++D+ DP D D+ +
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAALDMDVLYRSGETHQGV 60
Query: 205 ATGGKYVPRAILVD 246
AT Y PR + VD
Sbjct: 61 AT---YCPRLVSVD 71
>07_01_1081 + 9831606-9832499
Length = 297
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 82 GNQIGAKFWEVISDEHG--IDPTGTYHGDSDLQLERIN 189
G+Q +KFW+ + E G ++ + YH ++ Q ER+N
Sbjct: 173 GSQFTSKFWQKLQVEMGTRLNFSTAYHPQTNGQTERVN 210
>01_05_0507 -
22800124-22800163,22800411-22800554,22801291-22801850,
22803207-22803264,22803885-22804124,22804191-22804315
Length = 388
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 161 TPTSSWSASTCTITRRPEESTXLGLSLWT 247
TP +SW+A+ +I P + L L+L+T
Sbjct: 53 TPATSWTAACASIADLPSQGRWLSLALFT 81
>02_04_0648 - 24716249-24717841
Length = 530
Score = 27.9 bits (59), Expect = 2.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 94 GAKFWEVISDEHGIDPTGTYHG 159
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>03_06_0645 -
35257045-35257113,35257332-35257394,35257486-35257623,
35257987-35258056,35258218-35258361,35258523-35258641,
35258958-35259062,35259301-35259505,35259620-35260140
Length = 477
Score = 27.5 bits (58), Expect = 3.7
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 146 ERIT-ETPTSSWSASTCTITRRPEESTXLGLSLWTWSRDN-GLCTLXTIRSDL 298
+R+T TPT S S + RRPE + TW + LCT S L
Sbjct: 196 DRVTASTPTGSVSFERKVLPRRPESDGITYPDMDTWMKSGVPLCTFRVFSSGL 248
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFW 108
MRE V +Q G N +G+ FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>08_02_0843 - 21759183-21759556,21760255-21762913
Length = 1010
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 123 IGYNFPELSSNLIAALTGLYVYNFPHFKWNKNTFLVTTEIG 1
+ YN LS ++ A+L+ F ++ WNK L+ +EIG
Sbjct: 406 LSYNL--LSGDIPASLSKCINVTFVNWSWNKLAGLIPSEIG 444
>07_01_0914 -
7693305-7693513,7693613-7694111,7694716-7696316,
7696509-7696530
Length = 776
Score = 26.6 bits (56), Expect = 6.5
Identities = 21/83 (25%), Positives = 31/83 (37%)
Frame = -2
Query: 333 HPXAQRQSCPDGRSDRMVXSVQSPLSRLQVHKDSPRXVLSSGRLVIVHVDALQLEVGVSV 154
HP + PDG +D + P R+++ P ++ + VH L V
Sbjct: 311 HPVPFQSFLPDGFADPKEPLYEGPNFRVEIRNGRPTGIMCGLEMTYVHTYPL------VV 364
Query: 153 IRSRRIDAMLIGYNFPELSSNLI 85
R+ I A L Y P N I
Sbjct: 365 YRAAFIAAWLCTYCVPVEEGNFI 387
>06_03_0865 - 25516072-25517007
Length = 311
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +3
Query: 237 PCGPGAGT--MDSVRSGPFGQIFRP 305
P G G+G+ D G FGQIFRP
Sbjct: 157 PSGSGSGSDRSDLSHGGGFGQIFRP 181
>04_04_0701 + 27373057-27374013
Length = 318
Score = 26.6 bits (56), Expect = 6.5
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 77 NAAIKLELSSGKLYPMSMASIRRERITETPTSSWSASTCTITRRPEESTXLGLSLWTWSR 256
N A+K E + S++S+ R+ T T+S SA T T + P + S W+W +
Sbjct: 238 NKAVKTEAPTSAYSSSSLSSMSRDT---TATTS-SAGTSTGSSEPTSFPVVTPSSWSWDQ 293
>01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848
Length = 345
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 151 YHGDS-DLQLERINVYYNEATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGX 327
YHG D+ L N+Y + ++V ++ DLE + + D++ + +
Sbjct: 92 YHGQPCDIPLPDPNMYIDMVNQDEHVDPELVADLEKSRRSYPKRDNTAPDGWDSFIFTNK 151
Query: 328 RVLATTWAKG 357
V AT W G
Sbjct: 152 PVPATGWGDG 161
>09_02_0051 -
3606453-3606473,3606562-3606957,3608250-3608419,
3609654-3610707
Length = 546
Score = 26.2 bits (55), Expect = 8.6
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -2
Query: 168 VGVSVIRSRRIDAMLIGYNFPELSSNLIAALTGLY---VYNFPHFKWNKNTFLVTTEI 4
+GV V R IDA+ + Y F + L Y V + PHFK K + V E+
Sbjct: 354 IGVLVENGRTIDAINLAYAFELTNQFEPVELLKAYLQEVKSVPHFKTGKISLQVQNEM 411
>04_03_0295 - 14033864-14033977,14034485-14034520
Length = 49
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 261 LSRLQVHKDSPRXVLSSGRLVIVHVDALQLEVGVSVIRSRRIDAMLIG 118
+ R+Q +DS GR+ H A + GVSV +++R+ +++G
Sbjct: 1 MERIQREEDSRGDECPRGRVDAPHKFAATIGDGVSVAKAQRLWTVVVG 48
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 356 PLAQVVASTRXPKDKVVRTEDLTEWSXAYRVHCPGSRSTRIA 231
PL + A + K+ ++ED T WS + RVH G+R +A
Sbjct: 1096 PLMKSKAIAKPTKEAAGQSED-TLWSISSRVHGAGTRWGELA 1136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,583,273
Number of Sequences: 37544
Number of extensions: 261341
Number of successful extensions: 776
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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