Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0643
(379 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 176 6e-45
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 172 9e-44
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 167 2e-42
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 5e-39
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 72 1e-13
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 72 2e-13
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 71 4e-13
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 70 5e-13
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 5e-13
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 7e-13
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 52 2e-07
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 50 6e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.18
SB_52584| Best HMM Match : FAD_binding_5 (HMM E-Value=2.3e-09) 30 0.54
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 29 1.3
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.7
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 29 1.7
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 2.2
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_45544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_47407| Best HMM Match : RnaseH (HMM E-Value=5.9) 27 5.1
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 5.1
SB_29850| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_23023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_22266| Best HMM Match : Dimerisation (HMM E-Value=4.3) 27 5.1
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 27 5.1
SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 27 5.1
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_41392| Best HMM Match : Nanovirus_C8 (HMM E-Value=6.7) 27 6.7
SB_27499| Best HMM Match : RVT_1 (HMM E-Value=9.2e-39) 27 6.7
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_51142| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 26 8.8
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 26 8.8
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 26 8.8
SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05) 26 8.8
SB_27768| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 26 8.8
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 26 8.8
SB_21103| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 26 8.8
SB_56440| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_56354| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 26 8.8
SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_38698| Best HMM Match : MiaE (HMM E-Value=5.8) 26 8.8
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 26 8.8
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 176 bits (428), Expect = 6e-45
Identities = 83/113 (73%), Positives = 85/113 (75%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 219
FKMREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK
Sbjct: 212 FKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 271
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
YVPRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 272 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 172 bits (418), Expect = 9e-44
Identities = 82/111 (73%), Positives = 83/111 (74%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRAILVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 167 bits (407), Expect = 2e-42
Identities = 78/111 (70%), Positives = 83/111 (74%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIV +QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR++L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 156 bits (379), Expect = 5e-39
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 226 PRAILVDLEPG 258
PRAILVDLEPG
Sbjct: 61 PRAILVDLEPG 71
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVF 320
GTMDSVRSGPFGQIFRPDNFVF
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVF 92
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 72.1 bits (169), Expect = 1e-13
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKE 113
Score = 70.9 bits (166), Expect = 3e-13
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
++ RE + I GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 214 GKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
GK+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 546
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 71.7 bits (168), Expect = 2e-13
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +1
Query: 22 KSVFIPFK--MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERIN 189
++VF+ + +RE + I GQ G QIG WE+ EHGI P G D + + N
Sbjct: 576 RAVFVDLEPTVRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN 635
Query: 190 VYYNEATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTE 369
+++E GK+VPRA+ VDLEP + L G A +A+GHYT
Sbjct: 636 TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTV 695
Query: 370 GAE 378
G E
Sbjct: 696 GKE 698
Score = 71.3 bits (167), Expect = 2e-13
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 31 FIPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 204
FI RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 60 FILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 119
Query: 205 ATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
GK+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 120 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 177
Score = 63.7 bits (148), Expect = 5e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 222
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 223 VPRAILVDLEP 255
VPRA+ VDLEP
Sbjct: 574 VPRAVFVDLEP 584
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 70.5 bits (165), Expect = 4e-13
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 113
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 70.1 bits (164), Expect = 5e-13
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 222
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 223 VPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 112
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 70.1 bits (164), Expect = 5e-13
Identities = 42/115 (36%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
F RE + I GQ G QIG WE+ EHGI P G D + + N ++ E
Sbjct: 370 FWQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGA 429
Query: 214 GKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
GK+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 430 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 484
Score = 67.7 bits (158), Expect = 3e-12
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
++ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 214 GKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
GK+VPRA+ DLEP + L G A +A+GHYT G E
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 917
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 69.7 bits (163), Expect = 7e-13
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
++ RE V I GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 214 GKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
GK+VPRA+ VDLEP + L G A +A+GHYT G +
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKD 531
Score = 52.0 bits (119), Expect = 2e-07
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 91 IGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEPGQW 264
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 265 TLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+ L G A +A+GHYT G +
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQ 98
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 68.5 bits (160), Expect = 2e-12
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP T+ A L G A +A+GHYT G +
Sbjct: 61 HVPRAVFVDLEP---TVVALSPE-------QLITGKEDAANNYARGHYTIGKQ 103
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ DLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 113
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 68.5 bits (160), Expect = 2e-12
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 219
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 52.0 bits (119), Expect = 2e-07
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVF 320
GTMDSVRSGPFGQIFRPDNFVF
Sbjct: 16 GTMDSVRSGPFGQIFRPDNFVF 37
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = +1
Query: 214 GKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
GKYVPRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 56
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 50.0 bits (114), Expect = 6e-07
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = +1
Query: 208 TGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
TGG+YVPR+ILVDLEPG A WAKGHY+EGAE
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAE 67
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFV 317
GTMD+VR GP G +FRPDNFV
Sbjct: 27 GTMDAVRGGPLGNMFRPDNFV 47
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER----INVYYNEATG 213
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 214 GKY 222
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 103 FWEVISDEHGIDPTGTYHG-DSDLQLERINVYYNE 204
FWEVI++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = +1
Query: 178 ERINVYYNEATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKG 357
+ N ++ E GK+VPRA+ VDLEP + L G A +A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 358 HYTEGAE 378
HYT G E
Sbjct: 72 HYTVGKE 78
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 40.3 bits (90), Expect = 5e-04
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = +1
Query: 199 NEATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+EA GKYVPRA+LVDLEP + G A +A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.18
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 55 IVHIQAGQCGNQIGAKFWEVISDE 126
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_52584| Best HMM Match : FAD_binding_5 (HMM E-Value=2.3e-09)
Length = 215
Score = 30.3 bits (65), Expect = 0.54
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = -2
Query: 282 VXSVQSPLSRLQVHKDSPRXVLSSGRLVIVHVDALQ--LEVGVSVIRSRRIDAML---IG 118
+ S ++ L +Q++++SP +L+SGRL + +L+ L++ +RR+ M+ I
Sbjct: 9 IGSTKTRLHPVQLNEESPAEILNSGRLTWLRPSSLEQCLKLADEYPNARRVSGMIGAAIS 68
Query: 117 YNFPELSSNLIAALTGLYVYNFPHFKWNK 31
+ P+ +A L+ +V WN+
Sbjct: 69 SSVPD--DQHVAILSLAHVPELNAVDWNE 95
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++S +
Sbjct: 710 KRVEAIVEAPAPTNQSEVRSFLGSAQFSAK 739
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 115 ISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGQ 261
+ D G GD L L + +Y E G + V R + LEP Q
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEPKQ 840
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 337 ATTWAKGHYTEGAE 378
A WAKG YTEGAE
Sbjct: 6 ANNWAKGFYTEGAE 19
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 22 KSVFIPFKMREIVHIQAGQCGNQIGAKFWEVISDE---HGIDPTGTYHGDSDLQLERINV 192
KS +RE++ +Q G N +G +W + G P + D L E + V
Sbjct: 19 KSKMADATVREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTV 77
Query: 193 YYNEATGGKYVPRAILVDLE 252
E Y PR +L DL+
Sbjct: 78 TGQET----YTPRLLLYDLK 93
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 289 PNGPERTESIVPAPGPQG*PEXRTFLRSPRY 197
P G E+ ++V AP P E R+FL +Y
Sbjct: 639 PGGQEKVRAVVDAPAPTNVTELRSFLGMLQY 669
>SB_45544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 338 ASTRXPKDKVVRTEDLTEWSXAYRVHCPGSRSTRIARGT 222
+S+ +++ +E+ E+S +H P S S RI +GT
Sbjct: 5 SSSSSDENEGYESEEFAEYSKVQSIHSPRSSSGRIEKGT 43
>SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 139 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 168
>SB_47407| Best HMM Match : RnaseH (HMM E-Value=5.9)
Length = 271
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 18 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 47
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.1 bits (57), Expect = 5.1
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 22 KSVFIPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGID---PTGTYHGDSDLQLERINV 192
KS +RE++ +Q G N +G +W + D P + D L E + V
Sbjct: 19 KSKMADATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTV 77
Query: 193 YYNEATGGKYVPRAILVDLE 252
E Y PR +L DL+
Sbjct: 78 TGQET----YTPRLLLYDLK 93
>SB_29850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 84 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 113
>SB_23023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 116 YPMSMASIRRERITETP-----TSSWSASTCTITRRPEESTXLGLSLW 244
YP S +RR++ T P +SS+SAST IT + +G W
Sbjct: 385 YPPSPGGVRRDQTTPYPPTHGTSSSFSASTQWITTTTTAQSPVGTLPW 432
>SB_22266| Best HMM Match : Dimerisation (HMM E-Value=4.3)
Length = 290
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 70 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 99
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 900 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 929
>SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 667
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 401 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 430
>SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 84 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 113
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 616 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 645
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEXRTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 216 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 245
>SB_41392| Best HMM Match : Nanovirus_C8 (HMM E-Value=6.7)
Length = 295
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 74 VNAAIKLELSSGKLYPMSMASIRRERITETPTSSWS 181
VN A + GKLYP+ E + TPT +W+
Sbjct: 86 VNGAYDILDDGGKLYPVWCDFTGTEPFSATPTFAWT 121
>SB_27499| Best HMM Match : RVT_1 (HMM E-Value=9.2e-39)
Length = 872
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 304 PEKVRAVVDAPAPNNVTELRSFLGMLQY 331
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 835 PEKVRAVVDAPAPNNVTELRSFLGMLQY 862
>SB_51142| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 370
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 190 PEKVRAVVDAPAPTNVTELRSFLGMLQY 217
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 491 PEKVRAVVDAPAPTNVTELRSFLGMLQY 518
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 597 PEKVRAVVDAPAPTNVTELRSFLGMLQY 624
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 736 PEKVRAVVDAPAPTNVTELRSFLGMLQY 763
>SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 239 LWTWSRDNGLCTLXTIRSDLPSGQL 313
L T++RD+G C + SDLP+ +L
Sbjct: 782 LTTYARDSGYCPMTQKMSDLPAVRL 806
>SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05)
Length = 509
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 134 MPCSSDITSQNLAPI*LP--H*PACMC 60
M CS D+T ++ P+ LP H C+C
Sbjct: 207 MICSDDLTGADVLPVALPCGHEACCLC 233
>SB_27768| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 366
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 246 PEKVRAVVDAPAPTNVTELRSFLGMLQY 273
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 1305 PEKVRAVVDAPAPTNVTELRSFLGMLQY 1332
>SB_21103| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 366
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 246 PEKVRAVVDAPAPTNVTELRSFLGMLQY 273
>SB_56440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 310 LSGRKI*PNGPERTESIVPAPGPQ 239
L+GRK PN P + P P PQ
Sbjct: 347 LNGRKSNPNPPHNGPKVHPQPSPQ 370
>SB_56354| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 340
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 268 ESIVPAPGPQG*PEXRTFLRSPRYSTR 188
E+IV AP P E RTFL S ++ +
Sbjct: 204 EAIVEAPAPTNQSEVRTFLGSAQFCAK 230
>SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 358 PEKVRAVVDAPAPTNVTELRSFLGMLQY 385
>SB_38698| Best HMM Match : MiaE (HMM E-Value=5.8)
Length = 284
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 68 PEKVRAVVDAPAPTNVTELRSFLGMLQY 95
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 280 PERTESIVPAPGPQG*PEXRTFLRSPRY 197
PE+ ++V AP P E R+FL +Y
Sbjct: 614 PEKVRAVVDAPAPTNVTELRSFLGMLQY 641
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,084
Number of Sequences: 59808
Number of extensions: 274632
Number of successful extensions: 760
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -