Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0643
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 165 7e-42
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 161 2e-40
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 156 6e-39
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 156 6e-39
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 154 2e-38
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 153 5e-38
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 79 1e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 79 1e-15
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 77 3e-15
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 77 4e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 77 4e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 76 1e-14
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 76 1e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 74 3e-14
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 72 1e-13
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 72 1e-13
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 72 1e-13
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 70 5e-13
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 69 1e-12
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 67 3e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 64 4e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 64 4e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 52 1e-07
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 31 0.27
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 4.5
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 27 4.5
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 27 4.5
AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic mul... 27 5.9
AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell... 27 5.9
Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 26 7.8
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 26 7.8
U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine rece... 26 7.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 165 bits (402), Expect = 7e-42
Identities = 79/111 (71%), Positives = 82/111 (73%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG Y+GDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA LVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 161 bits (391), Expect = 2e-40
Identities = 76/111 (68%), Positives = 80/111 (72%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH+QAGQCGNQIGAKFWEVISDEHGI P GTY G+SDLQLERINVYYNEA GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 156 bits (378), Expect = 6e-39
Identities = 75/111 (67%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVHIQAGQCGNQIG+KFWEVISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAE 111
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 156 bits (378), Expect = 6e-39
Identities = 75/111 (67%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVHIQAGQCGNQIG+KFWEVISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAE 111
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 154 bits (373), Expect = 2e-38
Identities = 72/111 (64%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH+QAGQCGNQIG+KFWEVISDEHGI P GT+ G+SDLQLERI+VYYNEA GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 153 bits (370), Expect = 5e-38
Identities = 71/111 (63%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH+QAGQCGNQIG+KFWEVISDEHGI P GT+ G++DLQLERI+VYYNEA GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+LVDLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (283), Expect = 2e-27
Identities = 55/111 (49%), Positives = 68/111 (61%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ GTY GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRAILVDL+P + G W++G+Y +GAE
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAE 111
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (283), Expect = 2e-27
Identities = 55/111 (49%), Positives = 68/111 (61%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ GTY GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRAILVDL+P + G W++G+Y +GAE
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAE 111
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 79.0 bits (186), Expect = 1e-15
Identities = 41/111 (36%), Positives = 54/111 (48%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + G A +A+GHYT G E
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 79.0 bits (186), Expect = 1e-15
Identities = 41/111 (36%), Positives = 54/111 (48%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + G A +A+GHYT G E
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 77.4 bits (182), Expect = 3e-15
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE--RINVYYNEATGGK 219
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRAI VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKE 113
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 77.0 bits (181), Expect = 4e-15
Identities = 41/111 (36%), Positives = 55/111 (49%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + G A +A+GHYT G E
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 77.0 bits (181), Expect = 4e-15
Identities = 41/111 (36%), Positives = 55/111 (49%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + G A +A+GHYT G E
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 75.8 bits (178), Expect = 1e-14
Identities = 39/111 (35%), Positives = 55/111 (49%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + + G A +A+GHYT G E
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 75.8 bits (178), Expect = 1e-14
Identities = 39/111 (35%), Positives = 55/111 (49%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + + G A +A+GHYT G E
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKE 111
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 74.5 bits (175), Expect = 2e-14
Identities = 46/114 (40%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL---QLERINVYYNEATGGK 219
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVR-TTLSLGXRVLATTWAKGHYTEGAE 378
+VPR + VDLEP + RS L G A +A+G YT G E
Sbjct: 67 HVPRCLFVDLEP-TVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGRE 119
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 74.1 bits (174), Expect = 3e-14
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = +1
Query: 43 KMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGG 216
+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 217 KYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
K+VPRAI+VDLEP L G A +A+GHYT G E
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKE 118
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 72.1 bits (169), Expect = 1e-13
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVR-TTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA++VDLEP + RS L G A +A+GHYT G E
Sbjct: 61 HVPRAVMVDLEPTVID-EIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 72.1 bits (169), Expect = 1e-13
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVR-TTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA++VDLEP + RS L G A +A+GHYT G E
Sbjct: 61 HVPRAVMVDLEPTVID-EIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 72.1 bits (169), Expect = 1e-13
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVR-TTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA++VDLEP + RS L G A +A+GHYT G E
Sbjct: 61 HVPRAVMVDLEPTVID-EIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 70.1 bits (164), Expect = 5e-13
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 222
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 223 VPRAILVDLEPGQWTLYAXDHSVRSSVR-TTLSLGXRVLATTWAKGHYTEGAE 378
VPRA++VDLEP + RS L G A +A+GHYT G E
Sbjct: 61 VPRAVMVDLEPTVID-EIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 112
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 68.5 bits (160), Expect = 1e-12
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +1
Query: 34 IPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG-TYHGDSDLQLERINVYYNEAT 210
+P RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+
Sbjct: 1 MPSDGRECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM 60
Query: 211 GGKYVPRAILVDLEPGQWTLYAXDHSVRSSV--RTTLSLGXRVLATTWAKGHYTEGAE 378
GK+VPRAI VDLEP L + V ++ + G A +A+GHYT G E
Sbjct: 61 NGKHVPRAIYVDLEP--TVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKE 116
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 67.3 bits (157), Expect = 3e-12
Identities = 39/111 (35%), Positives = 55/111 (49%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MRE++ I GQ G QIG WE+ EHGI P GT + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PR+I VDLEP + + G A +A+GHYT G E
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKE 110
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 63.7 bits (148), Expect = 4e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 55 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 234
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 235 ILVDLEP 255
+LVDLEP
Sbjct: 66 VLVDLEP 72
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 63.7 bits (148), Expect = 4e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 55 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 234
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 235 ILVDLEP 255
+LVDLEP
Sbjct: 66 VLVDLEP 72
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 52.4 bits (120), Expect = 1e-07
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 124 EHGIDPTGTYHGDSDL---QLERINVYYNEATGGKYVPRAILVDLEPGQWTLYAXDHSVR 294
EHGI P G YH + D + E IN ++ E GGK+VPR + VDLEP + R
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEP-TVVDEVRTGTYR 62
Query: 295 SSVR-TTLSLGXRVLATTWAKGHYTEGAE 378
S L G A +A+G YT G E
Sbjct: 63 SLFHPEQLLSGKEDAANCYARGRYTIGRE 91
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 31.1 bits (67), Expect = 0.27
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 201 RGDRRKVRXSGYPCGPGAGTMDSVRSGPFG 290
RGDR + G P PGAG + +SGP G
Sbjct: 451 RGDRGDIGPPGLPGQPGAGEISGSQSGPRG 480
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 112 VISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDL 249
+ S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 114 YIR*AWHRSDGNVSRRLRPPAGA 182
Y+ HRSDG+V RR+ PA +
Sbjct: 267 YVNSPRHRSDGSVERRVSSPANS 289
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 114 YIR*AWHRSDGNVSRRLRPPAGA 182
Y+ HRSDG+V RR+ PA +
Sbjct: 267 YVNSPRHRSDGSVERRVSSPANS 289
>AF116529-1|AAD05570.1| 961|Caenorhabditis elegans synthetic
multivulva protein LIN-35 Rb protein.
Length = 961
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 97 LQFDCRIDRPVCVQFPSF*ME*KHFSSN 14
L+ DC I R +C QF ++ +HFS +
Sbjct: 338 LENDCTIIRALCTQFGGSVLDARHFSDH 365
>AF000195-1|AAC24266.2| 961|Caenorhabditis elegans Abnormal cell
lineage protein 35 protein.
Length = 961
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 97 LQFDCRIDRPVCVQFPSF*ME*KHFSSN 14
L+ DC I R +C QF ++ +HFS +
Sbjct: 338 LENDCTIIRALCTQFGGSVLDARHFSDH 365
>Z79758-8|CAI79179.1| 695|Caenorhabditis elegans Hypothetical
protein W10D5.3g protein.
Length = 695
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 351 SPSCCQHPXAQRQSCPDGRSDRMVXSVQSPLSRLQVHKDSPRXVLSS 211
SP Q P Q Q+ GR+++MV Q L + Q + SP+ + S
Sbjct: 593 SPMINQAPHFQMQNGLIGRNNQMVHMQQHHLQQQQQQQQSPQIMSPS 639
>Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical
protein W10D5.3f protein.
Length = 763
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 351 SPSCCQHPXAQRQSCPDGRSDRMVXSVQSPLSRLQVHKDSPRXVLSS 211
SP Q P Q Q+ GR+++MV Q L + Q + SP+ + S
Sbjct: 661 SPMINQAPHFQMQNGLIGRNNQMVHMQQHHLQQQQQQQQSPQIMSPS 707
>Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical
protein W10D5.3c protein.
Length = 790
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 351 SPSCCQHPXAQRQSCPDGRSDRMVXSVQSPLSRLQVHKDSPRXVLSS 211
SP Q P Q Q+ GR+++MV Q L + Q + SP+ + S
Sbjct: 716 SPMINQAPHFQMQNGLIGRNNQMVHMQQHHLQQQQQQQQSPQIMSPS 762
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 214 LRSPRYSTR*CAPAGGRSLRDTFPSDRCHAHRI 116
LRSPR C P GR RDT + R+
Sbjct: 771 LRSPRVKRMGCLPCLGRKKRDTDENSHIRVKRM 803
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 214 LRSPRYSTR*CAPAGGRSLRDTFPSDRCHAHRI 116
LRSPR C P GR RDT + R+
Sbjct: 416 LRSPRVKRMGCLPCLGRKKRDTDENSHIRVKRM 448
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 214 LRSPRYSTR*CAPAGGRSLRDTFPSDRCHAHRI 116
LRSPR C P GR RDT + R+
Sbjct: 368 LRSPRVKRMGCLPCLGRKKRDTDENSHIRVKRM 400
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 214 LRSPRYSTR*CAPAGGRSLRDTFPSDRCHAHRI 116
LRSPR C P GR RDT + R+
Sbjct: 1096 LRSPRVKRMGCLPCLGRKKRDTDENSHIRVKRM 1128
>U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein14 protein.
Length = 337
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = -2
Query: 117 YNFPELSSNLIAAL--TGLYVYNFPH--FKWNKNT 25
YN P+ +NL+ AL T LY+Y H FK+ T
Sbjct: 176 YNIPQTINNLLVALLSTALYIYLCYHLIFKFGYTT 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,367,709
Number of Sequences: 27780
Number of extensions: 203830
Number of successful extensions: 715
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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