Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0643
         (379 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   6.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   6.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   6.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   6.4  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    20   8.4  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    20   8.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     20   8.4  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 15  LLEKCFYSI*NEGNCTHTGRSMRQ 86
           LL   F  + +EG CT  G  +++
Sbjct: 43  LLNNYFKCLMDEGRCTAEGNELKR 66


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 160 DSDLQLERINVYYNEATGGKYV 225
           D+ L+   I  Y N+  GG++V
Sbjct: 72  DARLKFSNIAPYLNQIYGGQFV 93


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 15  LLEKCFYSI*NEGNCTHTGRSMRQ 86
           LL   F  + +EG CT  G  +++
Sbjct: 43  LLNNYFKCLMDEGRCTAEGNELKR 66


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 15  LLEKCFYSI*NEGNCTHTGRSMRQ 86
           LL   F  + +EG CT  G  +++
Sbjct: 43  LLNNYFKCLMDEGRCTAEGNELKR 66


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 45 NEGNCTHTGRSMRQ 86
          +EG CT+ GR +++
Sbjct: 49 DEGPCTNEGRELKK 62


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 45 NEGNCTHTGRSMRQ 86
          +EG CT+ GR +++
Sbjct: 49 DEGPCTNEGRELKK 62


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 54  FPHFKWNKNTFLVT 13
           FP  KW++  FL T
Sbjct: 152 FPECKWSRKGFLRT 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,071
Number of Sequences: 438
Number of extensions: 2442
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)