Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0643
(379 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 153 4e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 151 2e-37
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 151 2e-37
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 151 2e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 149 6e-37
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 149 8e-37
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 146 3e-36
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 144 2e-35
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 144 2e-35
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 76 7e-15
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 75 2e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 75 2e-14
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 72 1e-13
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 72 1e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 3e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 3e-13
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 70 6e-13
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 70 6e-13
At4g37190.1 68417.m05265 expressed protein 33 0.083
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 2.4
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 2.4
At4g11390.1 68417.m01837 DC1 domain-containing protein contains ... 27 4.1
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 4.1
At2g28220.1 68415.m03426 aspartyl protease family protein contai... 27 4.1
At1g64870.1 68414.m07354 hypothetical protein 27 4.1
At1g01580.1 68414.m00075 ferric-chelate reductase, putative simi... 26 7.2
At3g17620.1 68416.m02251 F-box family protein contains Pfam prof... 26 9.6
At3g07470.1 68416.m00891 expressed protein contains Pfam profile... 26 9.6
At2g40640.2 68415.m05013 expressed protein 26 9.6
At2g40640.1 68415.m05012 expressed protein 26 9.6
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 26 9.6
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 153 bits (371), Expect = 4e-38
Identities = 71/112 (63%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 222
MREI+H+Q GQCGNQIG+KFWEVI DEHG+DPTG Y+GDS DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 223 VPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
VPRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 112
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 151 bits (365), Expect = 2e-37
Identities = 70/111 (63%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG ++ G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 151 bits (365), Expect = 2e-37
Identities = 70/111 (63%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG ++ G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 151 bits (365), Expect = 2e-37
Identities = 70/111 (63%), Positives = 79/111 (71%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV+ DEHGIDPTG Y G+SDLQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRAIL+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (361), Expect = 6e-37
Identities = 71/111 (63%), Positives = 78/111 (70%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 149 bits (360), Expect = 8e-37
Identities = 71/112 (63%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGD-SDLQLERINVYYNEATGGKY 222
MREI+HIQ GQCGNQIG+KFWEVI DEHGID TG Y GD +DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 223 VPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
VPRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 112
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 146 bits (355), Expect = 3e-36
Identities = 70/111 (63%), Positives = 77/111 (69%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (349), Expect = 2e-35
Identities = 67/111 (60%), Positives = 78/111 (70%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 144 bits (348), Expect = 2e-35
Identities = 66/111 (59%), Positives = 77/111 (69%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y G++DLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 226 PRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
PRA+L+DLEPG + G WAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 76.2 bits (179), Expect = 7e-15
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P GT DS + + N +++E + G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ +DLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGRE 113
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 74.9 bits (176), Expect = 2e-14
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 74.9 bits (176), Expect = 2e-14
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 72.1 bits (169), Expect = 1e-13
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 72.1 bits (169), Expect = 1e-13
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 3e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 3e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 69.7 bits (163), Expect = 6e-13
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLGXRVLATTWAKGHYTEGAE 378
+VPRA+ VDLEP + L G A +A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 32.7 bits (71), Expect = 0.083
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGI------DPTGTYHG-DSDLQLERINVYYNE 204
MREIV IQ G+ N +G+ FW + G+ DP H D D+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 205 ATGGKYVPRAILVDLEPGQWTL 270
AT Y PR + V+L+ T+
Sbjct: 61 AT---YTPRLVSVNLKGALGTM 79
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 94 GAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILV 243
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 52 EIVHIQAGQCGNQIGAKFWEVISD 123
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g11390.1 68417.m01837 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 514
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 184 INVYYNEATGGKYVPRAILVDLEPGQWTLYAXDHSVRSSVRTTLSLG 324
+++ Y E GKY +L P W + DH R+S+ T LG
Sbjct: 320 LSLCYGEKASGKYWCDICEKELNPSTWFYTSKDH--RASLHTKCVLG 364
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 67 QAGQCGNQIGAKFWEVISDEHGIDPTGTYHG 159
QA G IG ++W +IS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At2g28220.1 68415.m03426 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 756
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 118 SDEHGIDPTGTYH--GDSDLQLERINVYYNEATGG 216
SD I P T H G +DL L++ N+Y TGG
Sbjct: 674 SDTIDIFPVITMHFSGGADLVLDKYNMYLETITGG 708
>At1g64870.1 68414.m07354 hypothetical protein
Length = 304
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 203 RRPEESTXLGLSLWTWSRDNG---LCTLXTIRSDLPSGQLCLWAIGCWQQL 346
RRP + L ++ W W D G + ++ T+ SDL L A+ C++ L
Sbjct: 28 RRPPAESLLVMATWLWFEDFGFGNIFSIITVFSDLLIVDLANEAVLCFRCL 78
>At1g01580.1 68414.m00075 ferric-chelate reductase, putative similar
to ferric-chelate reductase (FRO1) [Pisum sativum]
GI:15341529; contains Pfam profile: PF01794 ferric
reductase like transmembrane component
Length = 725
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 107 GKLYPMSMASIRRERITETPTSSWSASTC-TITRRPEESTXLGLSLWTWSRDN 262
GK+ + ++ R T +PTSSW ++ I P+ES +L R N
Sbjct: 625 GKVESKQVQNVDRPSPTSSPTSSWGYNSLREIESTPQESLVQRTNLHFGERPN 677
>At3g17620.1 68416.m02251 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 398
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 111 FPELSSNLIAALTGLYVYNF 52
FPE+SSNLI ++ L +NF
Sbjct: 220 FPEISSNLIHSVYFLLCFNF 239
>At3g07470.1 68416.m00891 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 169
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 130 GIDPTGTYHGDSDLQLERINVYYNEATGGKY 222
GI P G D++ R +VY N+A KY
Sbjct: 43 GIFPKGVREFTFDVETGRFSVYLNQACEAKY 73
>At2g40640.2 68415.m05013 expressed protein
Length = 352
Score = 25.8 bits (54), Expect = 9.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 131 ASIRRERITETPTSSWSA 184
AS+ +ER+T T SSW +
Sbjct: 184 ASVEKERVTTTSVSSWES 201
>At2g40640.1 68415.m05012 expressed protein
Length = 383
Score = 25.8 bits (54), Expect = 9.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 131 ASIRRERITETPTSSWSA 184
AS+ +ER+T T SSW +
Sbjct: 184 ASVEKERVTTTSVSSWES 201
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 294 SDRMVXSVQSPLSRLQVHKDSPRXVLSSGR 205
SDR+ S+ S LS LQ S R +SGR
Sbjct: 550 SDRLCQSLSSELSALQERMTSRRMYRTSGR 579
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,937,311
Number of Sequences: 28952
Number of extensions: 191221
Number of successful extensions: 534
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 517767328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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