Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0640
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.41 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.71 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   5.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   6.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 641 PAPV*RGPVCPTGMPHPISAKNRPKPNIL--SPVCKNY 534
           PA   R    PTG+P P ++ + P  NI   SP  ++Y
Sbjct: 211 PAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSY 248


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/41 (19%), Positives = 20/41 (48%)
 Frame = -3

Query: 163 RGSFIWSMPLSMFGQIMLPVISCIFLLWSKXLGCKPFIIYA 41
           +G   W  P  +     + +++    +W++ +G + F +YA
Sbjct: 391 KGDIFWFSPFLVANLAFVTIVTYETFVWTQIMGAEFFKLYA 431


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 648 SPASPRIKGPSLPNXYAP 595
           SP+SPRI  PS     +P
Sbjct: 66  SPSSPRISSPSSTKSGSP 83



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 648 SPASPRIKGPSLPNXYAPSHKRQKSP 571
           S   P  K PS P   +PS  +  SP
Sbjct: 58  STLDPGRKSPSSPRISSPSSTKSGSP 83


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 433 GLVYRRPRGLYITIHDKGHIFDILKT 510
           GL   RP+  Y T +D   + +ILK+
Sbjct: 14  GLALARPQEKYTTKYDNIDLEEILKS 39


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 507 DWPEHAVR 530
           DWPEHA R
Sbjct: 518 DWPEHADR 525


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 190 SVKARPLLSRGSFIWSM 140
           S+  RP+ + G F WS+
Sbjct: 559 SISIRPISTLGWFFWSL 575


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 526 TACSGQSSKYQICXLYHE 473
           TA +G  S Y+IC   HE
Sbjct: 791 TAEAGFMSFYEICDFLHE 808


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,646
Number of Sequences: 336
Number of extensions: 2940
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)