Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0640
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...    92   3e-19
Z81500-2|CAB04096.1|  394|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z81524-1|CAB04249.1|  356|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U64847-3|AAB04872.1|  350|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = +1

Query: 325 LQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDK--GHIFD 498
           LQDR EKL++ +L  ++ + MPIVYTPTVG ACQ FG +YR P+GLYITI+D     I  
Sbjct: 114 LQDRNEKLYYRVLCDNVKELMPIVYTPTVGQACQHFGFIYRNPKGLYITINDNSISKIHQ 173

Query: 499 ILKTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQ 615
           IL    +       +  GERILG G  L   G GIPVG+
Sbjct: 174 ILANWPTENVRAIVITDGERILGLGD-LGTYGIGIPVGK 211



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 135 RGIDHIKDPRLNKGLAFTLEE 197
           RGID +K P LNKG+AF+L E
Sbjct: 50  RGIDLLKSPGLNKGMAFSLHE 70



 Score = 32.3 bits (70), Expect = 0.30
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 179 SLHARRAQALGIHGLLAPKFKTQEER 256
           SLH R  Q LG+HGLL P F T+E++
Sbjct: 67  SLHER--QYLGVHGLLPPAFMTEEQQ 90


>Z81500-2|CAB04096.1|  394|Caenorhabditis elegans Hypothetical
           protein F11D11.3 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 370 HNQVN*KIVFHXYLATQSNKGIYSNRRHIY 281
           HN++N +  FH YL+ QS+   YS  R I+
Sbjct: 33  HNEINVEAPFHMYLSAQSDS--YSILRQIF 60


>Z81524-1|CAB04249.1|  356|Caenorhabditis elegans Hypothetical
           protein F32H5.1 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 572 PKPNILSPVCKNYCADSMLWPV 507
           P P   +P C+ +C  ++ WP+
Sbjct: 216 PCPGYHTPTCEEHCTSNITWPI 237


>U64847-3|AAB04872.1|  350|Caenorhabditis elegans Hypothetical
           protein F08F3.6 protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = +3

Query: 45  YIINGLQ-PXYLDQRRNMHEITGNIICPNMLRGIDHIKDPRLNKG-LAFTLEEPKL*VFT 218
           +II GL    +  +RR+ + +   + CP +++  D I   R   G LA  + +PK  +F 
Sbjct: 267 HIIQGLDIQGWHPERRHENVVMDFLECPYIMKARDEIDVRRRKDGMLATIVNKPKSFMFV 326

Query: 219 DFWH---PNLKPRKNV 257
             WH   P   P+  V
Sbjct: 327 -VWHERFPEYNPKYRV 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,672,119
Number of Sequences: 27780
Number of extensions: 270647
Number of successful extensions: 584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)