Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0640
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19900.1 68415.m02326 malate oxidoreductase, putative similar... 108 3e-24
At5g25880.1 68418.m03071 malate oxidoreductase, putative similar... 105 3e-23
At5g11670.1 68418.m01364 malate oxidoreductase, putative similar... 103 1e-22
At1g79750.1 68414.m09304 malate oxidoreductase, putative similar... 94 6e-20
At4g00570.1 68417.m00080 malate oxidoreductase, putative similar... 84 9e-17
At2g13560.1 68415.m01495 malate oxidoreductase, putative similar... 76 2e-14
At5g51650.1 68418.m06404 hypothetical protein 29 3.5
At4g19490.2 68417.m02867 expressed protein 28 6.1
At4g19490.1 68417.m02866 expressed protein 28 6.1
>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P51615) {Vitis vinifera}
Length = 581
Score = 108 bits (260), Expect = 3e-24
Identities = 55/108 (50%), Positives = 72/108 (66%)
Frame = +1
Query: 319 TELQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDKGHIFD 498
TELQ+R E+LF+ LL ++ + +PIVYTPTVG ACQKFG ++RRP+GL+I++ DKG I D
Sbjct: 103 TELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKILD 162
Query: 499 ILKTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQTGPLYTGAG 642
+LK + GERILG G L G GIPVG+ LY+ G
Sbjct: 163 VLKNWPERNIQVIVVTDGERILGLGD-LGCQGMGIPVGKLA-LYSALG 208
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 138 GIDHIKDPRLNKGLAFTLEE 197
G ++DPR NKGLAFT +E
Sbjct: 42 GYSLLRDPRYNKGLAFTEKE 61
>At5g25880.1 68418.m03071 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P12628) {Phaseolus vulgaris}
Length = 588
Score = 105 bits (251), Expect = 3e-23
Identities = 52/107 (48%), Positives = 71/107 (66%)
Frame = +1
Query: 322 ELQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDKGHIFDI 501
+LQ+R E+LF+ LL ++ + +P+VYTPTVG ACQK+G +YRRP+GLYI++ +KG I ++
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKILEV 170
Query: 502 LKTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQTGPLYTGAG 642
LK + GERILG G L G GIPVG+ LYT G
Sbjct: 171 LKNWPQRGIQVIVVTDGERILGLGD-LGCQGMGIPVGKLS-LYTALG 215
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 138 GIDHIKDPRLNKGLAFTLEE 197
G ++DPR NKGLAFT +E
Sbjct: 49 GYTLMRDPRYNKGLAFTDKE 68
>At5g11670.1 68418.m01364 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP|P12628) {Phaseolus vulgaris}
Length = 588
Score = 103 bits (246), Expect = 1e-22
Identities = 50/107 (46%), Positives = 72/107 (67%)
Frame = +1
Query: 322 ELQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDKGHIFDI 501
+LQ+R E+LF+ LL ++ + +P+VYTPTVG ACQK+G ++R+P+GLYI++++KG I ++
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLYISLNEKGKILEV 170
Query: 502 LKTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQTGPLYTGAG 642
LK + GERILG G L G GIPVG+ LYT G
Sbjct: 171 LKNWPQRGIQVIVVTDGERILGLGD-LGCQGMGIPVGKLS-LYTALG 215
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 138 GIDHIKDPRLNKGLAFTLEE 197
G ++DPR NKGLAFT +E
Sbjct: 49 GYTLMRDPRYNKGLAFTDKE 68
>At1g79750.1 68414.m09304 malate oxidoreductase, putative similar to
malate oxidoreductase (NADP-dependent malic enzyme)
GB:P34105 (Populus balsamifera subsp. trichocarpa)
Length = 646
Score = 94.3 bits (224), Expect = 6e-20
Identities = 46/107 (42%), Positives = 68/107 (63%)
Frame = +1
Query: 322 ELQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDKGHIFDI 501
+LQ+ E+LF+ LL + + +P++YTPTVG ACQK+G ++ RP+GL+I++ +KG I ++
Sbjct: 169 DLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGSIFLRPQGLFISLKEKGKIHEV 228
Query: 502 LKTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQTGPLYTGAG 642
L+ + GERILG G L G GIPVG+ LYT G
Sbjct: 229 LRNWPEKNIQVIVVTDGERILGLGD-LGCQGMGIPVGKLS-LYTALG 273
>At4g00570.1 68417.m00080 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum
tuberosum}
Length = 607
Score = 83.8 bits (198), Expect = 9e-17
Identities = 42/106 (39%), Positives = 59/106 (55%)
Frame = +1
Query: 325 LQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDKGHIFDIL 504
L DR E L++ +L +I F PI+YTPTVG CQ + +YRRPRG+Y + DKG + ++
Sbjct: 112 LHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYRRPRGMYFSAKDKGEMMSMI 171
Query: 505 KTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQTGPLYTGAG 642
+ + G RILG G L + G GIP+G+ AG
Sbjct: 172 YNWPAPQVDMIVITDGSRILGLGD-LGVQGIGIPIGKLDMYVAAAG 216
>At2g13560.1 68415.m01495 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum
tuberosum}
Length = 623
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/106 (36%), Positives = 59/106 (55%)
Frame = +1
Query: 325 LQDRXEKLFFSLLDCDIXKFMPIVYTPTVGXACQKFGLVYRRPRGLYITIHDKGHIFDIL 504
L DR E +++ +L +I ++ PIVYTPTVG CQ + ++RRPRG+Y + D+G + ++
Sbjct: 119 LHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMV 178
Query: 505 KTGQSMLSAQ*FLQTGERILGXGRFLALMGWGIPVGQTGPLYTGAG 642
+ + G RILG G L + G GI VG+ AG
Sbjct: 179 YNWPAEQVDMIVVTDGSRILGLGD-LGVHGIGIAVGKLDLYVAAAG 223
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 135 RGIDHIKDPRLNKGLAFTLEE 197
+G+D + DP NKG AFT+ E
Sbjct: 45 QGLDILHDPWFNKGTAFTMTE 65
>At5g51650.1 68418.m06404 hypothetical protein
Length = 206
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 168 NKGLAFTLEEPKL*VFTDFWHP 233
NKG+ + +P+ +F DFWHP
Sbjct: 8 NKGMPYKAPKPRF-LFEDFWHP 28
>At4g19490.2 68417.m02867 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 185 HARRAQALGIHGLLAPKFKTQE 250
H R A+ LG+ LL PK K QE
Sbjct: 597 HGRWAKLLGVRALLHPKLKLQE 618
>At4g19490.1 68417.m02866 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 185 HARRAQALGIHGLLAPKFKTQE 250
H R A+ LG+ LL PK K QE
Sbjct: 597 HGRWAKLLGVRALLHPKLKLQE 618
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,007,039
Number of Sequences: 28952
Number of extensions: 255680
Number of successful extensions: 601
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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