Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0637
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 3e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 3e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 3e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 3e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 3e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 2e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 89 2e-18
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 76 2e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 1e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 5e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 43 2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 33 0.15
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.47
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 1.4
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 1.9
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 1.9
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 1.9
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.5
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 4.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 28 4.4
SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015) 28 4.4
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (457), Expect = 3e-48
Identities = 88/97 (90%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIV+D
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 120 bits (289), Expect = 8e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 AK 268
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (457), Expect = 3e-48
Identities = 88/97 (90%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIV+D
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 154
Score = 117 bits (282), Expect = 6e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (457), Expect = 3e-48
Identities = 88/97 (90%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIV+D
Sbjct: 118 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 154
Score = 118 bits (285), Expect = 2e-27
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (457), Expect = 3e-48
Identities = 88/97 (90%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIV+D
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 124 bits (300), Expect = 4e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 AK 268
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (457), Expect = 3e-48
Identities = 88/97 (90%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIV+D
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 120 bits (289), Expect = 8e-28
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +2
Query: 83 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 263 AK 268
+K
Sbjct: 61 SK 62
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 118 bits (285), Expect = 2e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +2
Query: 89 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 354
AQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1
Query: 427 NREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
N + M +IMFETFN+PAMYVAIQAVLS TGIV+D
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 117
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANR 432
A R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NR
Sbjct: 61 ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120
Query: 433 EKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
EKM ++MFE + +Y+AIQAVL+ + TG+V+D
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVID 158
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 101 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 253
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGD
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGD 59
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +1
Query: 334 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRT 513
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 514 RPVVPTGIVLD 546
TG V D
Sbjct: 2189 ASGRTTGTVFD 2199
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 208
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 382 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLS TG+VLD
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLD 180
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 471
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 472 PAMYVAIQAVLSRTRPVVPTGIVLD 546
PA ++ +VL+ G+V+D
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVID 87
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 208
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 77 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 223
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 286 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 399
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +1
Query: 448 IMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
IMFE FN+PA+YVAIQAVLS TG+V D
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFD 33
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 205 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 89
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 337 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTR 516
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 517 PVVPTGIV 540
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 435
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 408 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 500
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 175 VPLDRGKAPPSGRDGRYGTEGLLCRRWAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 348
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 349 TFYN 360
T N
Sbjct: 497 TCPN 500
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYNE 363
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 95 EVAALVVDNGSGMCKAGFAGDDAPRAV 175
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 355 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPV 522
Y +L V +PV T+ + + N + TQ+M T P Y + V +R PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 386 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAH--LLHKSPSVPYRPS 213
CS + + C + ++V CS + V + ++C+ + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 212 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 120
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 452 CSKHSTRPPCTSPSKPCSRVRVRS 523
C H+ R P T+PS PC V S
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATS 383
>SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)
Length = 1052
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 548 KSSTIPVGTTGRVRESTAWMATYMAGVLNVS 456
+S T+P G + TAWMA Y +LN+S
Sbjct: 661 RSKTLPGGGRLCQADGTAWMALYCIVMLNIS 691
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 314 VTIPCSMGYLRVRIPLLLCAHLLHKSPSVP 225
V PC M LRVR+ C +LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 195 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 85
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 251 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 105
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,213,962
Number of Sequences: 59808
Number of extensions: 497087
Number of successful extensions: 1743
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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