Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0637
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 188 2e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 188 2e-48
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 188 2e-48
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 186 7e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 186 9e-48
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 186 9e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 186 9e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 186 1e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 186 1e-47
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 168 2e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 159 1e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 2e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 108 2e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 94 5e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 2e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.072
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.67
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.7
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 28 4.7
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 28 4.7
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 28 4.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.2
At4g22790.1 68417.m03289 MATE efflux family protein contains Pfa... 27 6.2
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 6.2
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 8.3
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 8.3
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (459), Expect = 2e-48
Identities = 89/97 (91%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFNTPAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 102 bits (245), Expect = 1e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (458), Expect = 2e-48
Identities = 89/97 (91%), Positives = 89/97 (91%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFNTPAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 102 bits (245), Expect = 1e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 188 bits (458), Expect = 2e-48
Identities = 89/97 (91%), Positives = 89/97 (91%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFNTPAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 102 bits (245), Expect = 1e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (454), Expect = 7e-48
Identities = 88/97 (90%), Positives = 89/97 (91%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN PAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 102 bits (245), Expect = 1e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 186 bits (453), Expect = 9e-48
Identities = 86/97 (88%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 186 bits (453), Expect = 9e-48
Identities = 86/97 (88%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 186 bits (453), Expect = 9e-48
Identities = 86/97 (88%), Positives = 90/97 (92%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN+PAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 87/97 (89%), Positives = 88/97 (90%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN PAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 102 bits (245), Expect = 1e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 87/97 (89%), Positives = 88/97 (90%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANRE
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRE 119
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETFN PAMYVAIQAVLS TGIVLD
Sbjct: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 102 bits (245), Expect = 1e-22
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 168 bits (408), Expect = 2e-42
Identities = 75/97 (77%), Positives = 85/97 (87%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NRE
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNRE 120
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFE+F P+MY+ IQAVLS TGIVLD
Sbjct: 121 KMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLD 157
Score = 97.1 bits (231), Expect = 7e-21
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGD +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 159 bits (385), Expect = 1e-39
Identities = 71/97 (73%), Positives = 83/97 (85%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 435
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+RE
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADRE 74
Query: 436 KMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
KMTQIMFETF P+MY+ +QA LS TG VLD
Sbjct: 75 KMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLD 111
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (376), Expect = 2e-38
Identities = 75/112 (66%), Positives = 85/112 (75%)
Frame = +1
Query: 211 RDGRYGTEGLLCRRWAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 390
RDG E + + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL TG+VLD
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLD 145
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG-DGH 259
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG +GH
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGH 50
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 108 bits (260), Expect = 2e-24
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 456
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 457 ETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
E +N +++ IQAVL+ + TG+V+D
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVID 155
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 253
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 94.3 bits (224), Expect = 5e-20
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 462
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 463 FNTPAMYVAIQAVLS-----RTRPVVPTGIVLD 546
FN P +Y+A+ +VL+ T TG+V+D
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVD 178
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 190
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/94 (39%), Positives = 58/94 (61%)
Frame = +1
Query: 265 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 444
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 445 QIMFETFNTPAMYVAIQAVLSRTRPVVPTGIVLD 546
++MFE + PA+++A VL+ T +V+D
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVD 178
Score = 56.8 bits (131), Expect = 9e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 193
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 265 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 438
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 7e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 193
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 468
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 469 TPAMYVAIQAVLS 507
Y + QAVLS
Sbjct: 117 VSGFYASEQAVLS 129
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 196
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 462
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 463 FNTPAMYVA 489
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 199
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 468
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 469 TPAMYVAIQAVLS 507
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 253
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.072
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 228 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 91
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 30.7 bits (66), Expect = 0.67
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 405 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAY 512
GSP+ +G + E+D D + NI+H + +H + A+ Y
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 438
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 438
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
ALV +C FAGD A AV SI G G+ G K S+ G AK
Sbjct: 37 ALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSFADAGQSAK 89
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 316 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 495
+W +E + + + + P LL EA + PK+ E +++TF T + I+
Sbjct: 483 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRF--IK 540
Query: 496 AVLSRT 513
LSRT
Sbjct: 541 PKLSRT 546
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 316 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 495
+W +E + + + + P LL EA + PK+ E +++TF T + I+
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRF--IK 545
Query: 496 AVLSRT 513
LSRT
Sbjct: 546 PKLSRT 551
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 204 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 82
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g22790.1 68417.m03289 MATE efflux family protein contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 491
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 301 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT-QIMFETFNTPA 477
H I+T + E I L + PE P+L PL + + +T IMF T +
Sbjct: 134 HKILTGFGQREDISFIAKKYLLYLLPEL-PILSFLCPLKAYLSSQGVTLPIMFTTAAATS 192
Query: 478 MYVAIQAVLSRTRPV 522
+++ I VLS+ R +
Sbjct: 193 LHIPINIVLSKARGI 207
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 308 IPCSMGYLRVRIPLLLCAHLLHKSPSVPYRPS 213
+ + Y R+R C L H+ P PY PS
Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 399 H*GSPQPQGQQREDDPDHVRN 461
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 281 VRIPLLLCAHLLHKSPSVPYRPSRPDGGA 195
V +PL C + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 316 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 465
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,675,107
Number of Sequences: 28952
Number of extensions: 323468
Number of successful extensions: 947
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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