Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0634
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135; Eukar... 129 4e-29
UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protei... 114 1e-24
UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole gen... 113 3e-24
UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18; Euka... 111 1e-23
UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53; Eukary... 110 2e-23
UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 - R... 105 5e-22
UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5; P... 100 2e-20
UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium ... 96 4e-19
UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9; Eukaryo... 93 3e-18
UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep... 93 5e-18
UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protei... 91 2e-17
UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4; Dikar... 83 3e-15
UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27; Euka... 83 4e-15
UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole gen... 75 8e-13
UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1; Encepha... 73 4e-12
UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lambl... 60 3e-08
UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillar... 60 4e-08
UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;... 56 7e-07
UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;... 55 1e-06
UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 54 2e-06
UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 52 1e-05
UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2; Desulf... 50 3e-05
UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1; T... 50 5e-05
UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 48 1e-04
UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2; Thermoprote... 47 3e-04
UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7; Archae... 47 3e-04
UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 45 0.001
UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17; n... 44 0.003
UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C reduc... 44 0.003
UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4; Archae... 43 0.004
UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6; Haloba... 43 0.004
UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environment... 42 0.009
UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6; Thermo... 42 0.012
UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1; Nanoar... 41 0.022
UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4; Methan... 40 0.038
UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;... 40 0.050
UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos ... 39 0.066
UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;... 39 0.088
UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aqui... 35 1.4
UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3; Aquifex... 35 1.4
UniRef50_Q7QRU7 Cluster: GLP_69_27268_26702; n=1; Giardia lambli... 33 3.3
UniRef50_Q839F9 Cluster: 50S ribosomal protein L22; n=3; Bacteri... 33 3.3
UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11; Alphap... 33 4.4
UniRef50_A5K6W0 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
UniRef50_Q9PQQ5 Cluster: 50S ribosomal protein L22; n=2; Ureapla... 33 5.8
UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19; Alphap... 32 7.6
>UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135;
Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens
(Human)
Length = 184
Score = 129 bits (312), Expect = 4e-29
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 4e-16
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protein
17, isoform a; n=5; Eukaryota|Rep: Ribosomal protein,
large subunit protein 17, isoform a - Caenorhabditis
elegans
Length = 187
Score = 114 bits (274), Expect = 1e-24
Identities = 61/143 (42%), Positives = 72/143 (50%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF 225
YSR P+N KSCKARGS+LRVHFKNT+E AM +R MPLRRA +L +V E KE +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Query: 226 NGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXXXXX 405
+GG+GR AQ + P +
Sbjct: 66 HGGIGRAAQTKQWNTTQGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAA 125
Query: 406 XXXXXXXXXHGRINPYMSXPCHI 474
HGRINPYMS PCHI
Sbjct: 126 KLRRRTYRAHGRINPYMSSPCHI 148
Score = 79.0 bits (186), Expect = 7e-14
Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCL-XQTYIP 428
+KQ+ TTQGRWP KSA+FLL LL+NAESNA+ K LDVD LVI+HI V RA L +TY
Sbjct: 75 TKQWNTTQGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRA 134
Query: 429 CSRSHQPLHVXSLPHSKXVSANAKMLS*GSPLTDDAPAK 545
R + ++ S H + + A + + S TDDA K
Sbjct: 135 HGRINP--YMSSPCHIEVILAEKEDVV--SKPTDDAAPK 169
>UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 261
Score = 113 bits (271), Expect = 3e-24
Identities = 66/147 (44%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Frame = +1
Query: 43 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRR 222
+YSREPDNP KSCKARG +LRVHFKNT ETA IRK+PL +A RYL++V+ K+ IPF R
Sbjct: 81 KYSREPDNPTKSCKARGLDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPFTR 140
Query: 223 FNGGVGRCAQASSLAQHRVAGPRNPPNSS---CSY*GXXXXXXXXXXXXXXXXXXXXXXX 393
F GVGR AQA + +H R P S+
Sbjct: 141 FCRGVGRTAQAKN--RHSNGQGRWPVKSAKYILDLLKNAESNADLKGLDVDSLYISHIQV 198
Query: 394 XXXXXXXXXXXXXHGRINPYMSXPCHI 474
HGRINPYMS PCHI
Sbjct: 199 NQAQKQRRRTYRAHGRINPYMSSPCHI 225
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 273 QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 401
QGRWP KSA+++L LL+NAESNAD K LDVD L I HIQVN+A
Sbjct: 159 QGRWPVKSAKYILDLLKNAESNADLKGLDVDSLYISHIQVNQA 201
>UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L17-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 176
Score = 111 bits (267), Expect = 1e-23
Identities = 66/149 (44%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M +YS+EPDN KSCKARG++LRVHFKNT ETA IRK+PL +A RYL++VI K+ IPF
Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSS---CSY*GXXXXXXXXXXXXXXXXXXXXX 387
RF GVGR AQA + +H R P S+
Sbjct: 61 TRFCRGVGRTAQAKN--RHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHI 118
Query: 388 XXXXXXXXXXXXXXXHGRINPYMSXPCHI 474
HGRINPYMS PCHI
Sbjct: 119 QVNQAAKQRRRTYRAHGRINPYMSNPCHI 147
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 273 QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 401
QGRWP KSA+F+L LL+NAESNA+ K LDVD L I HIQVN+A
Sbjct: 81 QGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQA 123
>UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53;
Eukaryota|Rep: 60S ribosomal protein L17 - Zea mays
(Maize)
Length = 171
Score = 110 bits (265), Expect = 2e-23
Identities = 65/149 (43%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M +YS+EP NP KS KA G +LRVHFKNT ETA +RK+PL +A RYL++VI K+ IPF
Sbjct: 1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSS---CSY*GXXXXXXXXXXXXXXXXXXXXX 387
RR+ GGVGR AQA S +H R P S+
Sbjct: 61 RRYCGGVGRTAQAKS--RHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHI 118
Query: 388 XXXXXXXXXXXXXXXHGRINPYMSXPCHI 474
HGRINPYMS PCHI
Sbjct: 119 QVNQAQKQRRRTYRAHGRINPYMSSPCHI 147
Score = 68.5 bits (160), Expect = 9e-11
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +3
Query: 273 QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 401
QGRWP KSA F+L LL+NAESNAD K LDVD L + HIQVN+A
Sbjct: 81 QGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQA 123
>UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 -
Rattus norvegicus (Rat)
Length = 220
Score = 105 bits (253), Expect = 5e-22
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V KK+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 217 RRFNGGVGRCAQASSL 264
RR+NGGV A+ L
Sbjct: 61 RRYNGGVESNAELKGL 76
Score = 39.1 bits (87), Expect = 0.066
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 330 ESNADNKTLDVDRLVIDHIQVNRAP 404
ESNA+ K LD D LVI+HIQVN+AP
Sbjct: 68 ESNAELKGLDGDSLVIEHIQVNKAP 92
Score = 34.7 bits (76), Expect = 1.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 433 HGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRIN YMS PCHI + + PK
Sbjct: 102 HGRINLYMSSPCHIEMILTEKEQIVPK 128
>UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5;
Plasmodium|Rep: Ribosomal protein L17, putative -
Plasmodium falciparum (isolate 3D7)
Length = 203
Score = 100 bits (240), Expect = 2e-20
Identities = 55/159 (34%), Positives = 74/159 (46%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M +Y+++ N K K G +LRVHFKNTYE A IR+M L A +YL +VIEKK C+PF
Sbjct: 1 MVKYAKKIRNLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
R++NGGVGR QA + P +
Sbjct: 61 RKYNGGVGRTNQAKEFNHTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINP+MS PCHI+ +++ + K
Sbjct: 121 KARPGRRRTYKAHGRINPFMSSPCHIQIIAREINKPAKK 159
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA-PCLXQTYIP 428
+K+F TQGRWP KS +FLL +L N ++NA+++ LDV +L + H+ VN+A P +TY
Sbjct: 73 AKEFNHTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVNKARPGRRRTYKA 132
Query: 429 CSRSH----QPLHVXSLPHSKXVSANAKMLS 509
R + P H+ + A +LS
Sbjct: 133 HGRINPFMSSPCHIQIIAREINKPAKKSLLS 163
>UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium
yoelii yoelii|Rep: Ribosomal protein L22 - Plasmodium
yoelii yoelii
Length = 249
Score = 96.3 bits (229), Expect = 4e-19
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M +Y++E NP K KA +LRVHFKNTYETA IR+M L A +YL VIEKK C+PF
Sbjct: 1 MVKYAKEIRNPGKCAKAAAVDLRVHFKNTYETARAIRRMNLLEAKKYLNAVIEKKRCVPF 60
Query: 217 RRFNGGVGRCAQA 255
RR+NGGVGR QA
Sbjct: 61 RRYNGGVGRTNQA 73
Score = 43.2 bits (97), Expect = 0.004
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNAD 344
+K+F TQGRWP KS +FLL +L N ++NA+
Sbjct: 73 AKEFNHTQGRWPVKSCKFLLNVLDNVQANAE 103
Score = 35.9 bits (79), Expect = 0.62
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 433 HGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINP+MS PCHI+ +++ + K
Sbjct: 184 HGRINPFMSSPCHIQVIAREITKPAKK 210
>UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9;
Eukaryota|Rep: 60S ribosomal protein L17 -
Cryptosporidium parvum Iowa II
Length = 187
Score = 93.5 bits (222), Expect = 3e-18
Identities = 54/147 (36%), Positives = 69/147 (46%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RY+ PD P+KS +GS+LRV +KNTYETA I+ M L A +YL +VI KK C+PF
Sbjct: 1 MVRYAVRPDTPSKSVMCKGSDLRVSYKNTYETATAIKGMYLLDARQYLLDVIAKKRCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RRFNGGVGR A+A+ + P
Sbjct: 61 RRFNGGVGRTAKANEFKLTQGRFPEKSCRFLLDLLQNAESNCDMKGLDVDRLMLVSAVVT 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIR 477
HGRI P+ S PC+I+
Sbjct: 121 HAPFNRRRTFRAHGRITPFKSQPCNIQ 147
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+ +F TQGR+P+KS FLL LL+NAESN D K LDVDRL++ V AP
Sbjct: 73 ANEFKLTQGRFPEKSCRFLLDLLQNAESNCDMKGLDVDRLMLVSAVVTHAP 123
>UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep:
SJCHGC09296 protein - Schistosoma japonicum (Blood
fluke)
Length = 193
Score = 92.7 bits (220), Expect = 5e-18
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Frame = +1
Query: 37 MGRYSREP--DNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECI 210
M +YS EP ++ +K+CKAR LR HFKN +E A ++ M L+RA YLKNVIEKKE I
Sbjct: 1 MVKYSWEPKDEDESKTCKARIPYLRTHFKNMHECACAVKGMTLQRAQTYLKNVIEKKEII 60
Query: 211 PFRRFNGGVGRCAQA 255
PFRRFNGGVGR AQA
Sbjct: 61 PFRRFNGGVGRHAQA 75
Score = 62.1 bits (144), Expect = 8e-09
Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNA---DNKTLDVDRLVIDHIQVNRAP 404
+K + TTQGRWPKKSA+ LLQLL NA SN D K + RL I HIQVN+AP
Sbjct: 75 AKVWKTTQGRWPKKSAQMLLQLLHNAFSNGVYKDIKGGEASRLFIKHIQVNQAP 128
Score = 37.1 bits (82), Expect = 0.27
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 433 HGRINPYMSXPCHIRXMSQRTRRCCPKVA 519
HGRINPYM PCH+ + PKVA
Sbjct: 138 HGRINPYMCSPCHVEVILATKDDIVPKVA 166
>UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protein
17, isoform b; n=48; Bilateria|Rep: Ribosomal protein,
large subunit protein 17, isoform b - Caenorhabditis
elegans
Length = 159
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF 225
YSR P+N KSCKARGS+LRVHFKNT+E AM +R MPLRRA +L +V E KE +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 309 LQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCL-XQTYIPCSRSHQPLHVXSLPHSKXV 485
L LL+NAESNA+ K LDVD LVI+HI V RA L +TY R + ++ S H + +
Sbjct: 66 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINP--YMSSPCHIEVI 123
Query: 486 SANAKMLS*GSPLTDDAPAK 545
A + + S TDDA K
Sbjct: 124 LAEKEDVV--SKPTDDAAPK 141
>UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4;
Dikarya|Rep: 60S ribosomal protein L17-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 187
Score = 83.4 bits (197), Expect = 3e-15
Identities = 51/159 (32%), Positives = 62/159 (38%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS P K KARG+ LR HFKN+ E A I M L++A +L NV E K+ +PF
Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RRFNGGVGR AQ + P
Sbjct: 61 RRFNGGVGRTAQGKEFGVTQARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGR+ Y+S P HI + PK
Sbjct: 121 AAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEEEEAVPK 159
Score = 72.1 bits (169), Expect = 8e-12
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3
Query: 255 KQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
K+FG TQ RWP KS +F LL+NAE+NA+ K LD+D+L+I H+QVN AP
Sbjct: 74 KEFGVTQARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAP 123
>UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27;
Eukaryota|Rep: 60S ribosomal protein L17-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 184
Score = 83.0 bits (196), Expect = 4e-15
Identities = 52/161 (32%), Positives = 61/161 (37%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RY NPAKS ARGS LRV FKNT ETA I L +A +YL+ V++ + IPF
Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RRFN +GR AQ + P
Sbjct: 61 RRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPKVA 519
HGRIN Y S P HI + K A
Sbjct: 121 QAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAA 161
Score = 63.7 bits (148), Expect = 3e-09
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +3
Query: 255 KQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
K+FG T+ RWP KS +F+ LL+NA +NA+ K LD +L + HIQVN+AP
Sbjct: 74 KEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAP 123
>UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 330
Score = 75.4 bits (177), Expect = 8e-13
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M +YSRE DNP K CK R S+ RVHFKNT ET ++ L A YL++ ++ +PF
Sbjct: 1 MVKYSRESDNPTKFCKTRDSDFRVHFKNTRETTDATSRLLLTMAREYLEDAPVHEQAMPF 60
Query: 217 RRFNGGVGRCAQASS 261
RF GVGR AQA +
Sbjct: 61 TRFCRGVGRTAQAKN 75
Score = 40.3 bits (90), Expect = 0.029
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3
Query: 273 QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQ 389
QG KS +++L LL++AESNAD K LDV+ I HIQ
Sbjct: 81 QGCSSVKSVKYILVLLKHAESNADLKGLDVNSPYISHIQ 119
>UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L17
- Encephalitozoon cuniculi
Length = 183
Score = 72.9 bits (171), Expect = 4e-12
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +1
Query: 43 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRR 222
+YS E +P+K+ KA+ N +V FK T E + +R+ + A++YLKNVI K EC+PFRR
Sbjct: 4 KYSYEIHDPSKAVKAKIDNAKVSFKKTREASCTLRRRKVLDAIQYLKNVIAKTECVPFRR 63
Query: 223 FNGGVGRCAQA 255
+N G G+ QA
Sbjct: 64 YNRGCGQTHQA 74
Score = 62.9 bits (146), Expect = 5e-09
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +3
Query: 270 TQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
T+GRWPKKSAEFL+ +L N + NA+ K LD LVI H+QV++AP
Sbjct: 100 TRGRWPKKSAEFLISVLENIKENAETKGLDPKDLVITHVQVSKAP 144
>UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_28895_29389 - Giardia lamblia
ATCC 50803
Length = 164
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M +Y+ + DN K+R ++ FKNTY T I+ M ++RA YL NV+ KE +PF
Sbjct: 1 MVKYAFKSDNLLVG-KSRRDGVKASFKNTYSTCRAIKGMGVKRAFAYLDNVLNHKEIVPF 59
Query: 217 RRFNGGVGRCAQA 255
+F GVGR +QA
Sbjct: 60 FKFYKGVGRHSQA 72
Score = 35.5 bits (78), Expect = 0.82
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADN-KTLDVDRLVIDHIQVNRA 401
GT +GRWP+KS + +L+ A SNA + + D L + VNRA
Sbjct: 76 GTDKGRWPEKSVVVVKDILKQAVSNAKHAHKKEEDELYVISYCVNRA 122
>UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillardia
theta|Rep: 60S ribosomal protein L17 - Guillardia theta
(Cryptomonas phi)
Length = 153
Score = 59.7 bits (138), Expect = 4e-08
Identities = 40/139 (28%), Positives = 51/139 (36%)
Frame = +1
Query: 97 NLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQASSLAQHR 276
N +VH KNT E I M L RA +LKNVI KKE +PF+ + G+GR +Q +
Sbjct: 14 NQKVHLKNTREVGCCIIGMTLGRAENFLKNVILKKEIVPFKVYRYGIGRKSQVNQSKNIS 73
Query: 277 VAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGRINPYM 456
P+ S HGR+N +
Sbjct: 74 GRWPKKSAKIILSLIKNLNSIVSKNKSEDNPFYIKNININQAVRGRRRTFRAHGRVNSFE 133
Query: 457 SXPCHIRXMSQRTRRCCPK 513
S PCHIR PK
Sbjct: 134 SNPCHIRISLTNNSTNIPK 152
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 276 GRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRA 401
GRWPKKSA+ +L L++N S + + I +I +N+A
Sbjct: 74 GRWPKKSAKIILSLIKNLNSIVSKNKSEDNPFYIKNININQA 115
>UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 191
Score = 55.6 bits (128), Expect = 7e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVID 380
+KQ G T+G WPK+SAEFLL L+NAE NA+ K LD D LV++
Sbjct: 64 AKQQGWTRGWWPKQSAEFLLHELKNAEGNAELKGLDTDSLVLN 106
Score = 52.8 bits (121), Expect = 5e-06
Identities = 33/66 (50%), Positives = 37/66 (56%)
Frame = +1
Query: 58 PDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 237
P+N KSCK+R SNL VHFKNT ET +LK V PF +NGGV
Sbjct: 19 PENLTKSCKSRSSNLHVHFKNTRETV-------------FLKRV-------PFCYYNGGV 58
Query: 238 GRCAQA 255
GRCAQA
Sbjct: 59 GRCAQA 64
>UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 405
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 4 FLSYFLLR-EIIMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYL 180
F+SY L + + +++ P KSCK+ GSNL VHFKN +E + I + + L
Sbjct: 54 FVSYNSLSLRVRLNVFTKLNKKPHKSCKSWGSNLCVHFKNIWEISQVIEGTDICKFTESL 113
Query: 181 KNVIEKKECIPFRRFNGGVGRCAQASSL 264
K V K + + F+ +NGGV R A ++
Sbjct: 114 KGVTLKNQYMLFQLYNGGVNRTKGAIAM 141
>UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L22P -
Sulfolobus solfataricus
Length = 157
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +3
Query: 276 GRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLXQTYIP 428
GR+PKK+ +L++L NAE+NA NK LDVD+L+I HI ++ L Q Y+P
Sbjct: 84 GRYPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITL-QRYMP 133
Score = 37.1 bits (82), Expect = 0.27
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 43 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRR 222
+Y + + K KA ++ ++ Y IR M L A +L V+E+KE +PF R
Sbjct: 5 KYPQLDVDELKIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWR 64
Query: 223 FNGGVGRCAQASSLAQHRVAGPRNP 297
+N G + S A+ ++ R P
Sbjct: 65 YNKGASHKSNIS--AKWKIKAGRYP 87
>UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 467
Score = 52.8 bits (121), Expect = 5e-06
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +1
Query: 49 SREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRFN 228
S E DNP K C S+ RVHFKNT T + L A YL++ + +++ +PF RF
Sbjct: 275 SGESDNPTKFCNTGDSDSRVHFKNTRVTTRATSMLLLTMARGYLEDALVREQTMPFTRFC 334
Query: 229 GGVGRCAQASSLAQH 273
G+ L H
Sbjct: 335 RGIPSMVNMVELTAH 349
>UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Archaeoglobus fulgidus
Length = 155
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = +3
Query: 276 GRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLXQTYIP 428
GR+P+K+A+++L++LRN E+NA+ K LDV+ LVI H Q + + + Y+P
Sbjct: 83 GRYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVI-ERYMP 132
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRR 222
Y+ +P++ K+ KA G + + FK+ E IR + A + L++V+E K IPF+R
Sbjct: 8 YAYKPEDETKAAKAMGYEMPISFKHAVEICRAIRGKKIEEARKLLEDVVEMKRAIPFKR 66
>UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L22P -
Aeropyrum pernix
Length = 156
Score = 50.4 bits (115), Expect = 3e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 258 QFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNR 398
++G GR+P K+A ++L+LL N E+NA NK LDV+RL I H+ ++
Sbjct: 78 KWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHK 124
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF 225
YS + + ++ KA N+ VH K E A I M + A RYL+ VIEK+E +PFRR
Sbjct: 6 YSVKLRDESEVAKAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRA 65
Query: 226 NG 231
+G
Sbjct: 66 HG 67
>UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L22,
putative - Trichomonas vaginalis G3
Length = 164
Score = 49.6 bits (113), Expect = 5e-05
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 70 AKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCA 249
+K+ KA RVHFK ET I+ M + A+ YL+ V+ K+ +PF R+ GG+ A
Sbjct: 13 SKALKASTGLERVHFKPMMETGRVIKGMKAQDAIAYLEAVMRKERAVPFFRYKGGISHHA 72
Query: 250 Q 252
Q
Sbjct: 73 Q 73
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 258 QFGTTQGRWPKKSAEFLLQLLRNAESNADNKT-LDVDRLVIDHIQVNRA 401
++G RWP K AE ++L++ A + A K ++VD +++ H+Q NRA
Sbjct: 76 EWGCPTSRWPVKCAELYIKLIKTALAGAPQKPGVNVDEVLVAHVQCNRA 124
>UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5;
Thermoplasmatales|Rep: 50S ribosomal protein L22P -
Thermoplasma acidophilum
Length = 151
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +3
Query: 201 RVYSIPSLQRRRWSLCSSKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVID 380
+ Y+IP R+ S + G GR+P K+A+ QLL N E+NA+ K L+ D LVI
Sbjct: 55 KTYAIPYF---RYLDSVSHRPGVGPGRYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIK 111
Query: 381 HIQVNRAPCLXQTYIP 428
HI N+ + + Y P
Sbjct: 112 HIAANKGR-MIKKYTP 126
Score = 35.1 bits (77), Expect = 1.1
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 31 IIMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECI 210
IIM YS E + KAR + K++ A +R MPL RA + VI K I
Sbjct: 2 IIMKGYSMEIEG--NHAKARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAI 59
Query: 211 PFRRF 225
P+ R+
Sbjct: 60 PYFRY 64
>UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2;
Thermoprotei|Rep: Ribosomal protein L22 - Cenarchaeum
symbiosum
Length = 152
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF 225
YS E +P + +A ++ K+ E ++ IR M + +A +L+ VIEKK +PFRRF
Sbjct: 6 YSFEGYDPTRHVRASLREKQISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRF 65
Query: 226 NGGVGRCAQASSLA 267
VG + +A
Sbjct: 66 KRQVGHRSDPGVMA 79
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLXQTYIPCSRSH 443
G GR+P+KSA ++LL N ESNA+ K +D+DRL I ++ L + +IP +
Sbjct: 76 GVMAGRYPEKSAAEFIKLLDNLESNAEYKGMDLDRLTIVGAVAHKG-ILIKRFIPRAMGR 134
Query: 444 QPLHVXSLPHSKXVSANA 497
L H + V+ A
Sbjct: 135 STPKNNVLTHVELVAREA 152
>UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7;
Archaea|Rep: 50S ribosomal protein L22P - Methanopyrus
kandleri
Length = 159
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNR 398
G GR+P+K+A +L++L +AE+NA+ K LD DRL I HI ++
Sbjct: 83 GWDAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHK 127
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 46 YSREPD--NPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFR 219
YS P+ + ++ KA LR+ K+ E IR MPL RA +L+ VI K+E +PFR
Sbjct: 9 YSIPPEELDDERTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFR 68
Query: 220 R 222
+
Sbjct: 69 K 69
>UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Pyrococcus abyssi
Length = 155
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLXQTY 422
G GR+P K A+ + ++L NA++NA K LD D+L I HI +R P L Y
Sbjct: 77 GFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWY 129
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 37 MGR---YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKEC 207
MGR YS + +P + +A G +LR+ K E +R M L A+RYL +VI +
Sbjct: 1 MGRRFDYSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRP 60
Query: 208 IPFRRFNGGVG 240
+P +R+N G
Sbjct: 61 VPLKRYNDSQG 71
>UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17;
n=11; Eutheria|Rep: Similar to 60S ribosomal protein L17
- Homo sapiens (Human)
Length = 102
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 327 AESNADNKTLDVDRLVIDHIQVNRAP 404
AESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 19 AESNAELKGLDVDSLVIEHIQVNKAP 44
>UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C
reductase iron-sulfur subunit, mitochondrial; n=1; Homo
sapiens|Rep: Similar to Ubiquinol-cytochrome C reductase
iron-sulfur subunit, mitochondrial - Homo sapiens
(Human)
Length = 282
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 327 AESNADNKTLDVDRLVIDHIQVNRAP 404
AESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 19 AESNAELKGLDVDSLVIEHIQVNKAP 44
>UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4;
Archaea|Rep: 50S ribosomal protein L22P - Uncultured
methanogenic archaeon RC-I
Length = 153
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF 225
Y+ E D PA + KA + V K+ E IR M L A YL++VI+KK +PF++
Sbjct: 6 YTAEFD-PATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQH 64
Query: 226 NGGVG 240
VG
Sbjct: 65 ARNVG 69
Score = 39.5 bits (88), Expect = 0.050
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 210 SIPSLQRRRWSLCSSKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDH 383
S+P Q R Q G GR+P K++ +L+LL++AE+NA+ K L+ + + I H
Sbjct: 58 SVPFKQHARNVGHKRHQSGWPSGRYPVKASTEILKLLKHAEANAEYKGLETENMRIIH 115
>UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L22P -
Halobacterium salinarium (Halobacterium halobium)
Length = 156
Score = 43.2 bits (97), Expect = 0.004
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHI 386
G GR+P+K+++ L+LL N +NAD + D D +VI+H+
Sbjct: 75 GWDAGRYPEKASKDFLKLLSNVSNNADQQGFDADEMVIEHV 115
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 46 YSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF 225
YS + D+ A S KA + K++ A I + A YL+ VI+++ +PF++
Sbjct: 5 YSVDVDSEA-SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQH 63
Query: 226 NGGVG 240
N GVG
Sbjct: 64 NSGVG 68
>UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environmental
samples|Rep: Ribosomal protein L22 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 175
Score = 41.9 bits (94), Expect = 0.009
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +1
Query: 85 ARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF-RRFNGGVGRCAQASS 261
AR N +H K+ Y+ A ++ M AV YL+ V++++ IP+ RR G G ++
Sbjct: 24 ARAVNRDIHHKHCYQIARAVKGMYAGDAVEYLEKVVKQEVAIPYKRRSRAGKG----GNT 79
Query: 262 LAQHRVA--GP-RNPPNSSCSY 318
+A HR GP R P N+S ++
Sbjct: 80 MAGHRKGKMGPGRYPRNASIAF 101
>UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L22P -
Pyrobaculum aerophilum
Length = 168
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNR 398
G +WP K A LQ+L N E+NA + LDVDR+VI H ++
Sbjct: 76 GWPVAKWPVKVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHK 120
>UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L22P -
Nanoarchaeum equitans
Length = 174
Score = 40.7 bits (91), Expect = 0.022
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = +1
Query: 43 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRR 222
RYS +N AK NL + K+ E A IR +PL+ A L+ V++K+ +PF R
Sbjct: 2 RYSVSLENVAK---LYAHNLPISTKHAVEIAKMIRYLPLQLAKEMLQKVLDKELAVPFFR 58
Query: 223 FNGGVGRCAQASSLAQHRVAGPRNPPNSS 309
+N + + ++ R P N++
Sbjct: 59 YNRDIPHRKKGQIHPYFKIKHGRFPENAT 87
>UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4;
Methanomicrobiales|Rep: 50S ribosomal protein L22P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 154
Score = 39.9 bits (89), Expect = 0.038
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 264 GTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNR 398
G GR+P+K++ L+LL N NA+ L+ D+L I H+ NR
Sbjct: 76 GWDAGRYPQKASRVYLRLLNNVRKNAEYNGLEGDQLRIVHVSANR 120
Score = 34.7 bits (76), Expect = 1.4
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 115 KNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 237
K+ E A IR M L A YL+ V+ ++ IPF+RFN V
Sbjct: 28 KHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNV 68
>UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;
Homo sapiens|Rep: CDNA FLJ27083 fis, clone SPL03425 -
Homo sapiens (Human)
Length = 136
Score = 39.5 bits (88), Expect = 0.050
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAP 59
>UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos
taurus (Bovine)
Length = 86
Score = 39.1 bits (87), Expect = 0.066
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 433 HGRINPYMSXPCHIRXMSQRTRRCCPKVAPLLMMPQRR 546
HGRINPYMS PCHI + + PK + ++R
Sbjct: 29 HGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKEKR 66
Score = 34.7 bits (76), Expect = 1.4
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 348 KTLDVDRLVIDHIQVNRAP 404
K LDVD LVI+HIQVN+AP
Sbjct: 1 KGLDVDSLVIEHIQVNKAP 19
>UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 587
Score = 38.7 bits (86), Expect = 0.088
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 61 DNP-AKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPFRRF-NGG 234
D P +SC + N ++H K T ETA +++ L A R L + K R+
Sbjct: 332 DQPLGRSCLSSFQNYQLHLKKTKETAQALKQKRLSEAARILSSKEANKLAQQARKIKRPA 391
Query: 235 VGRCAQAS-SLAQHRVAGPRNPPNSS 309
AQAS S AQ + R PP SS
Sbjct: 392 KSSSAQASTSSAQQALLKKRRPPQSS 417
>UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aquifex
aeolicus VF5|Rep: ribosomal protein L22 - Aquifex
aeolicus VF5
Length = 98
Score = 34.7 bits (76), Expect = 1.4
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLXQTYIPCSRSH 443
PKK+A ++L++ +NA+ K LD+DRL I + P L + +IP R+H
Sbjct: 22 PKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPIL-KKWIP--RAH 71
>UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3;
Aquifex|Rep: 50S ribosomal protein L22 - Aquifex
aeolicus
Length = 133
Score = 34.7 bits (76), Expect = 1.4
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLXQTYIPCSRSH 443
PKK+A ++L++ +NA+ K LD+DRL I + P L + +IP R+H
Sbjct: 57 PKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPIL-KKWIP--RAH 106
>UniRef50_Q7QRU7 Cluster: GLP_69_27268_26702; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_69_27268_26702 - Giardia lamblia
ATCC 50803
Length = 188
Score = 33.5 bits (73), Expect = 3.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 294 ISWASDPVLCQTACLSTATNAAVEATEWNTLFLFNHVFEVTNSTTERHLSDXHCGLICV 118
+ D LCQ + +A EA N F F VF++T + E HL + L+ V
Sbjct: 4 VDMLKDDFLCQEQYIVELPDALAEAARRNPDFAFEFVFDITGQSGEMHLLRQYDNLLRV 62
>UniRef50_Q839F9 Cluster: 50S ribosomal protein L22; n=3;
Bacteria|Rep: 50S ribosomal protein L22 - Enterococcus
faecalis (Streptococcus faecalis)
Length = 115
Score = 33.5 bits (73), Expect = 3.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNK-TLDVDRLVIDHIQVNRAPCLXQTYIPCSRSHQPLH 455
P KSA + ++L +A +NA+N LDV+ LV+ VN P + + S P++
Sbjct: 45 PNKSAGIIEKVLMSAVANAENNFDLDVESLVVSEAFVNEGPTMKRFRPRAKGSASPIN 102
>UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia typhi
Length = 119
Score = 33.1 bits (72), Expect = 4.4
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKT-LDVDRLVIDHIQVNRA 401
PK+ A+ + LR+A +NA+N LD+DRL+I V ++
Sbjct: 46 PKRIAKIVKDCLRSAVANAENNLGLDIDRLIITKATVGKS 85
>UniRef50_A5K6W0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1239
Score = 32.7 bits (71), Expect = 5.8
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 61 DNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVI-EKKECIPFRRFNGGV 237
DNP + ++RG + + M +K P+R++ Y K+ E+K+ F NGG
Sbjct: 252 DNPGERNRSRGKTTKRDGQKDKHGKMMRKKRPVRQSDSYGKHETGERKKGSLFYLTNGGS 311
Query: 238 GRCAQASSLAQHRVAGPRNPPNSSCS 315
G A S A A ++ +SS S
Sbjct: 312 GSTAIGRSAAGRSSASGQSSAHSSPS 337
>UniRef50_Q9PQQ5 Cluster: 50S ribosomal protein L22; n=2; Ureaplasma
parvum|Rep: 50S ribosomal protein L22 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 253
Score = 32.7 bits (71), Expect = 5.8
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKTLDVD--RLVIDHIQVNRAPCLXQT 419
PKK A +L+LL +A SN + + D+D +L I I N+ P + +T
Sbjct: 40 PKKFAPIVLKLLNSAISNVQHNSKDMDPSKLYIYKIVANQGPTMKRT 86
>UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia conorii
Length = 119
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKT-LDVDRLVIDHIQVNRA 401
PK+ A+ + L++A +NA+N LD+DRLV+ V +A
Sbjct: 46 PKRIAKVVKDCLQSAVANAENNLGLDIDRLVVTKATVGKA 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,603,868
Number of Sequences: 1657284
Number of extensions: 9540162
Number of successful extensions: 22878
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 22270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22871
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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