Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0634
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   7.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.4  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 238 GRCAQASSLAQHRVAGPRNPPNSSCSY 318
           G  A   +   H+  GPR+PP+ S  +
Sbjct: 341 GYSAMGMAAPHHQNFGPRHPPDCSMEF 367


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 145 RKMPLRRAVRYLKNVIEKKECIPFR 219
           R +PLR AV ++ ++I     +P R
Sbjct: 59  RALPLRSAVEHIPDLIADSRRLPLR 83


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 70  QGYPAPESNDP*LFLSRENMTR 5
           Q YP PE  DP  FL    + R
Sbjct: 98  QVYPDPEKFDPDRFLPENCLKR 119


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 75  IMQSAWFKPPCSL 113
           ++QS W  P C L
Sbjct: 559 VLQSLWASPTCDL 571


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,264
Number of Sequences: 336
Number of extensions: 2562
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)