Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0634
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 129 5e-30
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 129 5e-30
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 129 5e-30
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 129 5e-30
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 129 5e-30
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 129 5e-30
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 126 5e-29
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 40 0.008
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 129 bits (312), Expect = 5e-30
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 129 bits (312), Expect = 5e-30
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 129 bits (312), Expect = 5e-30
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 129 bits (312), Expect = 5e-30
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 129 bits (312), Expect = 5e-30
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 129 bits (312), Expect = 5e-30
Identities = 66/159 (41%), Positives = 82/159 (51%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
HGRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 126 bits (304), Expect = 5e-29
Identities = 65/159 (40%), Positives = 81/159 (50%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMXIRKMPLRRAVRYLKNVIEKKECIPF 216
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA I+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GXXXXXXXXXXXXXXXXXXXXXXXX 396
RR+NGGVGRCAQA + P+
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 397 XXXXXXXXXXXXHGRINPYMSXPCHIRXMSQRTRRCCPK 513
GRINPYMS PCHI + + PK
Sbjct: 121 KAPKMRRRTYRARGRINPYMSSPCHIEMILTEKEQIVPK 159
Score = 86.2 bits (204), Expect = 7e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 252 SKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
+KQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP
Sbjct: 73 AKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAP 123
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 39.5 bits (88), Expect = 0.008
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +3
Query: 285 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 404
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAP 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,157,455
Number of Sequences: 237096
Number of extensions: 1490457
Number of successful extensions: 3260
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3260
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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