Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0634
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.67 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 210 NTLFLFNHVFEVTNSTTERHLSDXHCGLICVLKV 109
           N  FL + +F+         LSD   GL C + V
Sbjct: 312 NARFLMDSMFDFAERVNSLRLSDAELGLFCSVVV 345


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 95  QTSVFTLRTHMRPQWXSE 148
           QT VF L TH    W S+
Sbjct: 171 QTIVFHLETHPNVTWYSQ 188


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 112 SEHGGLNHALCMISQGYP 59
           +E  GLNH   M++  YP
Sbjct: 223 TEDVGLNHFYFMLNHNYP 240


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 112 SEHGGLNHALCMISQGYP 59
           +E  GLNH   M++  YP
Sbjct: 223 TEDVGLNHFYFMLNHNYP 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,676
Number of Sequences: 438
Number of extensions: 2961
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)