Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0632
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.54 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 140 CTETLLRERRMNRGGTS-PRTASLXPPP 220
           CT T L+  R +      P++ASL PPP
Sbjct: 255 CTRTTLKNNRASPYPMQRPKSASLSPPP 282


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 63  Q*HFLHQPRHELFIDSSLY 7
           Q HFLH+ +++L +DS  +
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 63  Q*HFLHQPRHELFIDSSLY 7
           Q HFLH+ +++L +DS  +
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 63  Q*HFLHQPRHELFIDSSLY 7
           Q HFLH+ +++L +DS  +
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +1

Query: 388 VLLNSMRFIYNHVYNVYLCCC 450
           V  NS  + + H++  +  CC
Sbjct: 62  VCFNSYMYAFTHIFFFFAICC 82


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 166  ENEQGRNEPEDSITXPSA 219
            ENE G +EP +++T  +A
Sbjct: 974  ENEIGSSEPSETVTIITA 991


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 379 FGLVLLNSMRFIYNHVYNVYLCCCAXLNMH*FKYTCI 489
           F + LL    FI+ +++ ++L C     +H     CI
Sbjct: 176 FTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCI 212


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 186 VPPLFILLSLSNV 148
           V PLF+LL +SNV
Sbjct: 157 VYPLFVLLIVSNV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,614
Number of Sequences: 336
Number of extensions: 2170
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)