Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0632
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3 hom... 47 7e-05
AL035530-5|CAI19236.1| 322|Homo sapiens radial spokehead-like 2... 47 7e-05
AL035530-4|CAI19235.1| 418|Homo sapiens radial spokehead-like 2... 47 7e-05
AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AK057655-1|BAB71544.1| 322|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AF353618-1|AAK26432.1| 418|Homo sapiens radial spoke protein 3 ... 47 7e-05
AB065679-1|BAC45260.1| 919|Homo sapiens seven transmembrane hel... 31 4.7
AK096889-1|BAC04885.1| 299|Homo sapiens protein ( Homo sapiens ... 30 6.2
BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine phosph... 30 8.2
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph... 30 8.2
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein. 30 8.2
BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein. 30 8.2
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 30 8.2
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph... 30 8.2
AB040904-1|BAA95995.2| 1421|Homo sapiens KIAA1471 protein protein. 30 8.2
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph... 30 8.2
>BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3
homolog (Chlamydomonas) protein.
Length = 560
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 426 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 481
Query: 187 EPEDSITXPSAVS 225
EPED P A++
Sbjct: 482 EPEDEPGGPGAMT 494
>AL035530-5|CAI19236.1| 322|Homo sapiens radial spokehead-like 2
protein.
Length = 322
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 188 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 243
Query: 187 EPEDSITXPSAVS 225
EPED P A++
Sbjct: 244 EPEDEPGGPGAMT 256
>AL035530-4|CAI19235.1| 418|Homo sapiens radial spokehead-like 2
protein.
Length = 418
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 284 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 339
Query: 187 EPEDSITXPSAVS 225
EPED P A++
Sbjct: 340 EPEDEPGGPGAMT 352
>AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ25202 fis, clone REC05350. ).
Length = 560
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 426 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 481
Query: 187 EPEDSITXPSAVS 225
EPED P A++
Sbjct: 482 EPEDEPGGPGAMT 494
>AK057655-1|BAB71544.1| 322|Homo sapiens protein ( Homo sapiens
cDNA FLJ33093 fis, clone TRACH2000675, weakly similar to
RADIAL SPOKE PROTEIN 3. ).
Length = 322
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 188 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 243
Query: 187 EPEDSITXPSAVS 225
EPED P A++
Sbjct: 244 EPEDEPGGPGAMT 256
>AF353618-1|AAK26432.1| 418|Homo sapiens radial spoke protein 3
protein.
Length = 418
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 7 IERGVDEEFMPWLVKEVSLEIESIITSRDVITEIVRDVVEARGELYRNVAEREENEQGRN 186
IER ++ F+PWL+ EV +E + R V+ ++R+VVE R +Y E E+
Sbjct: 284 IERDIEIGFLPWLMNEVEKTMEYSMVGRTVLDMLIREVVEKRLCMY----EHGEDTHQSP 339
Query: 187 EPEDSITXPSAVS 225
EPED P A++
Sbjct: 340 EPEDEPGGPGAMT 352
>AB065679-1|BAC45260.1| 919|Homo sapiens seven transmembrane helix
receptor protein.
Length = 919
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 394 LNSMRFIYNHVYNVYLCCCAXLNMH*FKYTCIKLGIKSHFVCKN 525
LN F H+ ++ C L +H + ++ IK S+FVC N
Sbjct: 732 LNVFHFFVLHISVLFFCQSLLLEVHWYVFSIIKCPSLSYFVCFN 775
>AK096889-1|BAC04885.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ39570 fis, clone SKMUS2001850, highly similar to
Homo sapiens t(3;5)(q25.1;p34) fusion gene NPM-MLF1
mRNA. ).
Length = 299
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 70 ESIITSRDVITEIVRDVVEARGELYRNVAE---REENEQGRNEPEDSITXPS 216
ESI+ R+ + +++R E G ++++ R N +G N+ EDS+T S
Sbjct: 33 ESILAHRENMRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTATS 84
>BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 577
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 36 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 69
>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 1636
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1095 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128
>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
Length = 1320
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 779 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 812
>BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein.
Length = 619
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 78 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 111
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 449 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 482
>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
TD14 protein.
Length = 1636
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1095 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128
>AB040904-1|BAA95995.2| 1421|Homo sapiens KIAA1471 protein protein.
Length = 1421
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1133 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1166
>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
HD-PTP protein.
Length = 1636
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 GGTSPRTASLXPPPCLRRGRKSISKMTRRRETNN 280
G PR + PPPCLRRG + ++ E+ +
Sbjct: 1095 GPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQH 1128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,979,618
Number of Sequences: 237096
Number of extensions: 1280548
Number of successful extensions: 2836
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2836
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -