Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0631
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    29   2.8  
U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   2.8  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.8  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   2.8  
AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical...    28   5.0  
Z81147-4|CAB03529.1|  578|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +3

Query: 426 LIDRK*LLTNKTKIIFNYFIRILFYYFTAYEYI 524
           LID + LL NKT   F YF    F YFTA  ++
Sbjct: 619 LIDYEPLLFNKTTNRFEYFDSRGFLYFTAVNHL 651


>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 331 PSRITPFNPFQIPLLNTIIL 390
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 331 PSRITPFNPFQIPLLNTIIL 390
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 331 PSRITPFNPFQIPLLNTIIL 390
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37A1B.12 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 578 NRVSWNSCNNWELYF 622
           NR +WN  NNW L+F
Sbjct: 23  NRTNWNLKNNWNLFF 37


>Z81147-4|CAB03529.1|  578|Caenorhabditis elegans Hypothetical
           protein T09E11.5 protein.
          Length = 578

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 426 LIDRK*LLTNKTKIIFNYFIRILFYYFTAYEYIXA 530
           LID + LL NKT   F +F    F YFT   ++ A
Sbjct: 526 LIDYEPLLFNKTSNRFEFFDSRGFLYFTVINHLSA 560


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,262,093
Number of Sequences: 27780
Number of extensions: 153087
Number of successful extensions: 348
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)