Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0630
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43870.1 68415.m05454 polygalacturonase, putative / pectinase... 30 1.7
At5g63990.2 68418.m08034 3'(2'),5'-bisphosphate nucleotidase, pu... 29 3.0
At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase, pu... 29 3.0
At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase... 29 3.9
At5g61760.1 68418.m07749 inositol polyphosphate 6-/3-/5-kinase 2... 28 5.2
At2g05060.1 68415.m00528 protein kinase family protein contains ... 28 5.2
At1g28210.2 68414.m03463 DNAJ heat shock protein, putative stron... 28 5.2
At1g28210.1 68414.m03462 DNAJ heat shock protein, putative stron... 28 5.2
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 28 6.8
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 28 6.8
At3g19800.1 68416.m02508 expressed protein 27 9.0
>At2g43870.1 68415.m05454 polygalacturonase, putative / pectinase,
putative similar to SP|P48979 Polygalacturonase
precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus
persica}; contains PF00295: Glycosyl hydrolases family
28 (polygalacturonases)
Length = 384
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 518 LKKSEAKDGAKCKKVEITISVDGVAIQETTFRTI 619
L +S DG+KCK +T +DG + +R I
Sbjct: 64 LLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVI 97
>At5g63990.2 68418.m08034 3'(2'),5'-bisphosphate nucleotidase,
putative / inositol polyphosphate 1-phosphatase,
putative similar to SP|Q42546 3'(2'),5'-bisphosphate
nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana};
contains Pfam profile PF00459: Inositol monophosphatase
family
Length = 298
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 344 KGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIRGGQRC 490
+GK G P GR+WI P +G + +G + + K + G C
Sbjct: 120 RGKSEGGPKGRHWILDPIGGTRGFIRGEQYAIGLALLVEGKVVLGVMAC 168
>At5g63990.1 68418.m08035 3'(2'),5'-bisphosphate nucleotidase,
putative / inositol polyphosphate 1-phosphatase,
putative similar to SP|Q42546 3'(2'),5'-bisphosphate
nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana};
contains Pfam profile PF00459: Inositol monophosphatase
family
Length = 357
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 344 KGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIRGGQRC 490
+GK G P GR+WI P +G + +G + + K + G C
Sbjct: 120 RGKSEGGPKGRHWILDPIGGTRGFIRGEQYAIGLALLVEGKVVLGVMAC 168
>At3g59850.1 68416.m06679 polygalacturonase, putative / pectinase,
putative similar to SP|P48979 Polygalacturonase
precursor (EC 3.2.1.15) (PG) (Pectinase) {Prunus
persica}; contains PF00295: Glycosyl hydrolases family
28 (polygalacturonases)
Length = 388
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 518 LKKSEAKDGAKCKKVEITISVDGVAIQETTFRTI 619
L +S DG+KCK+ +T + G + + +R I
Sbjct: 66 LLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVI 99
>At5g61760.1 68418.m07749 inositol polyphosphate 6-/3-/5-kinase 2b
(IPK2b) contains Pfam domain, PF03770: inositol
polyphosphate kinase
Length = 300
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 636 GKLVHYIVRNVVSCMATPST-DIVISTFLHFAPSFASDFFSCCV 508
GKL H ++ +VVS A PS D+ I + + P + ++F C+
Sbjct: 79 GKLPHLVLDDVVSGYANPSVMDVKIGSRTWY-PDVSEEYFKKCI 121
>At2g05060.1 68415.m00528 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 315
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +2
Query: 299 GKTNSRMSTLLFWQGKGKGN---GAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKG 469
GK +S +L+ ++ + G A N IHA DSL+K L +F GC+++ Q G
Sbjct: 21 GKGSSGSVSLIKYKSRLDGQTLYAAVKTSNIIHA-DSLLK-EFQILSEFKGCSRIVQCYG 78
Query: 470 IRGGQRCNQETTVTQQLKKSEAKDGA 547
+ + N+E V + A G+
Sbjct: 79 TKVQETINEEGDVEFTIPMEYASGGS 104
>At1g28210.2 68414.m03463 DNAJ heat shock protein, putative strong
similarity to mitochondrial DnaJ protein (AtJ1)
GI:564030 from [Arabidopsis thaliana]; contains Pfam
profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
region, PF00684: DnaJ central domain (4 repeats);
identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
Length = 427
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 460 AERHSRWSKMQSRNYSYTATEEVRSERWREMQESRNND 573
+ER + K+Q RN Y + SER+R +S +D
Sbjct: 103 SERREEYDKLQYRNSDYVNNDGGDSERFRRAYQSNFSD 140
>At1g28210.1 68414.m03462 DNAJ heat shock protein, putative strong
similarity to mitochondrial DnaJ protein (AtJ1)
GI:564030 from [Arabidopsis thaliana]; contains Pfam
profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
region, PF00684: DnaJ central domain (4 repeats);
identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
Length = 408
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 460 AERHSRWSKMQSRNYSYTATEEVRSERWREMQESRNND 573
+ER + K+Q RN Y + SER+R +S +D
Sbjct: 103 SERREEYDKLQYRNSDYVNNDGGDSERFRRAYQSNFSD 140
>At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: LUC7 N_terminus
Length = 402
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +1
Query: 349 QRERGTERPQLDPRSGLARQGPRRLSR*VPRLHP--SRPAERHSRWSKMQSRNYSYTATE 522
++ER ER + S R+ + SR R + SR +RH + Q R+Y + +
Sbjct: 316 RKERSKERNSKERESSKDREKEQETSREHRRDYDRRSRDRDRHHDRDREQDRDYDRSHSR 375
Query: 523 EVRSERWREMQESRNND 573
R R R R D
Sbjct: 376 SRRRSRSRSRSRDRPRD 392
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 659 AVRYPGGEGNWYIILFETWFPVWQHRPQISLFR 561
AV Y +G+ YII+ +W P W + I L R
Sbjct: 302 AVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKR 334
>At3g19800.1 68416.m02508 expressed protein
Length = 229
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 248 KQYLGSEIEYGANGSKSGKTNSRMSTLLFWQGKGKGN 358
K S I+ NG S KT R+ TL +GK GN
Sbjct: 33 KHQASSPIQAAINGGGSSKTVKRLITLSPSEGKWNGN 69
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,406,486
Number of Sequences: 28952
Number of extensions: 297491
Number of successful extensions: 940
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -