BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0629 (648 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381... 73 1e-13 04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981... 67 1e-11 01_06_0353 - 28647452-28647477,28647568-28649134 46 3e-05 05_07_0017 + 27070332-27071886,27072238-27072344,27072427-27072531 43 2e-04 04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291,443... 36 0.021 08_01_0245 + 2023442-2023786,2024485-2024841,2024951-2025393,202... 36 0.028 03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 31 1.0 04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 28 7.4 04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407... 28 7.4 06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 27 9.7 05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190... 27 9.7 02_01_0601 + 4465775-4465924,4466070-4466531,4466613-4467445,446... 27 9.7 >03_05_0901 + 28635672-28636094,28637623-28637802,28637903-28638172, 28638506-28638757,28639205-28639453,28639533-28639606, 28639798-28639915,28640421-28640555,28640813-28640965 Length = 617 Score = 73.3 bits (172), Expect = 1e-13 Identities = 44/122 (36%), Positives = 64/122 (52%) Frame = +2 Query: 257 LGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGI 436 LG++++ K+E LQ SFK RG N + LS EQ + GVI +S GNH ++ + +LG Sbjct: 128 LGVNLWIKREDLQPVFSFKLRGAYNMMAKLSREQLERGVICSSAGNHAQGVALSAQRLGC 187 Query: 437 PCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLGKEKEMILH*TAMDHPDV 616 ++V+P+ T K E+LGA G A+ +A E+E DHPDV Sbjct: 188 DAVIVMPVTTPEIKWRSVERLGATVVLKGDSYDEAQSYAKQ-RCEQEGRTFIPPFDHPDV 246 Query: 617 FS 622 S Sbjct: 247 IS 248 >04_04_0753 - 27797298-27797547,27797765-27797951,27798040-27798113, 27798719-27798949,27799047-27799133,27799244-27799434 Length = 339 Score = 67.3 bits (157), Expect = 1e-11 Identities = 33/110 (30%), Positives = 59/110 (53%) Frame = +2 Query: 257 LGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGI 436 +G ++FK E Q G+FK RG N++ +L D++ GV+ S+GNH AA++ + GI Sbjct: 50 VGKQLFFKCECFQKAGAFKIRGASNSIFALDDDEASKGVVTHSSGNHAAAVALAAKLRGI 109 Query: 437 PCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLGKEKEMIL 586 P +V+P + KV+ ++ G + + + + A + +E IL Sbjct: 110 PAYIVIPRNAPACKVDNVKRYGGHIIWSDVSIESRESVAKRVQEETGAIL 159 >01_06_0353 - 28647452-28647477,28647568-28649134 Length = 530 Score = 45.6 bits (103), Expect = 3e-05 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Frame = +2 Query: 239 RSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKK-------NGVIAASTGNH 397 R H+ G+ D++ K + +TGSFK+ G+ L+S + ++ NGV ASTG+ Sbjct: 180 REHLGGM-TDLWVKHCGISHTGSFKDLGM-TVLVSQVNRLRRAPLSRPINGVGCASTGDT 237 Query: 398 GAALSYHSTQLGIPCIVVVP 457 AALS + GIP IV +P Sbjct: 238 SAALSAYCAAAGIPAIVFLP 257 >05_07_0017 + 27070332-27071886,27072238-27072344,27072427-27072531 Length = 588 Score = 43.2 bits (97), Expect = 2e-04 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%) Frame = +2 Query: 239 RSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKN-------GVIAASTGNH 397 R H+ G+ D++ K + +TGSFK+ G+ L+S + ++ GV ASTG+ Sbjct: 176 RDHLAGMN-DLWVKHCGISHTGSFKDLGM-TVLVSQVNRLRRAPLSRPIAGVGCASTGDT 233 Query: 398 GAALSYHSTQLGIPCIVVVP 457 AALS + GIP IV +P Sbjct: 234 SAALSAYCAAAGIPAIVFLP 253 >04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291, 4430715-4430794,4430923-4430974,4431045-4431182, 4431449-4431712,4432031-4432088,4433261-4433370, 4433604-4433795 Length = 377 Score = 36.3 bits (80), Expect = 0.021 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Frame = +2 Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGV-------IAASTGNHGAALS 412 G G I K EFLQ + S K+R A+ L D +KK + I ++GN G L+ Sbjct: 80 GCGARIAAKLEFLQPSFSVKDRP---AISMLEDAEKKGLITPGKTTLIEPTSGNMGIGLA 136 Query: 413 YHSTQLGIPCIVVVPIHTALNKVNKCEQLGAK 508 + + G I+ +P +T+L + GAK Sbjct: 137 FMAALKGYELILTMPSYTSLERRVTMRAFGAK 168 >08_01_0245 + 2023442-2023786,2024485-2024841,2024951-2025393, 2025475-2025569,2026302-2026477 Length = 471 Score = 35.9 bits (79), Expect = 0.028 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +2 Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNAL--ISLSDEQKKNGVIA-ASTGNHGAALSYHST 424 G G IY K+E L +TG+ K + NA+ + L+ K +IA G HG A + Sbjct: 147 GTGPMIYLKREDLNHTGAHK---INNAVAQVLLAKRLGKERIIAETGAGQHGVATATVCA 203 Query: 425 QLGIPCIV 448 + G+ CI+ Sbjct: 204 RFGLQCII 211 >03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623, 6054749-6055300,6055387-6055622,6055914-6056130 Length = 482 Score = 30.7 bits (66), Expect = 1.0 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Frame = +2 Query: 260 GMDIYFKQEFLQYTGSFKER---GVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQL 430 G +I K EFL GS K+R + + D V S G+ +L+ + Sbjct: 72 GCEILGKAEFLNPGGSVKDRVAVKIIEEALESGDLLCGGTVTEGSAGSTAISLAIVAPAY 131 Query: 431 GIPCIVVVPIHTALNKV 481 G C VV+P A+ KV Sbjct: 132 GCKCHVVIPDDAAIEKV 148 >04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164, 35385254-35385372,35385701-35385811,35386068-35386595, 35386702-35386881,35386957-35387556,35387646-35388066, 35388183-35388280,35388372-35389260,35389366-35389544, 35389647-35389763,35389862-35389952,35390578-35390753 Length = 1901 Score = 27.9 bits (59), Expect = 7.4 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +2 Query: 200 TNCRGSSSYTVHPRSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALIS-LSDEQKKNGVI 376 T+ G S +V P S + L F + Q + F N+L S + N + Sbjct: 1242 TDQTGQRSDSVLPSSKKKSLSFSSSFSKR-TQPSHLFSGNRASNSLKSPVPIGNVDNMIC 1300 Query: 377 AASTGNHGAALSYHSTQLGIP 439 AAST N G A + H T L +P Sbjct: 1301 AASTVNTGDAETSHKTPLSLP 1321 >04_03_0574 - 17338777-17339077,17339390-17340222,17340304-17340765, 17340843-17341030,17341244-17341576,17341665-17341796, 17342604-17342643 Length = 762 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 233 HPRSHVRGLGMDIYFKQEFLQYTGSFKERGV 325 HP S RG+G D+ +K QY+ +++R V Sbjct: 265 HP-SRTRGIGSDVPWKHGLPQYSSQYRKRKV 294 >06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971, 2574129-2574254,2574522-2574680,2574857-2575050, 2575251-2575376 Length = 339 Score = 27.5 bits (58), Expect = 9.7 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Frame = +2 Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKN----GV---IAASTGNHGAALS 412 G+ I K E Q S K+R +AL + D ++K GV + ++GN G ++ Sbjct: 46 GVNARIVGKLESYQPLCSVKDR---SALRMIEDAEEKGLISPGVTTLVEPTSGNLGIGVA 102 Query: 413 YHSTQLGIPCIVVVPIHTALNKVNKCEQLGAK 508 Y++ G + V+P +L+K LGA+ Sbjct: 103 YNALLKGYRFVAVMPAEYSLDKQMLLTYLGAE 134 >05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664, 1902740-1902821,1902928-1903054,1903369-1903686, 1903785-1903846,1903988-1904074,1904139-1904195, 1906113-1906197,1906916-1907185,1908158-1908254, 1908390-1908436,1908826-1908939,1909024-1909117, 1909360-1909457,1910356-1910455,1911445-1911521, 1911824-1913122 Length = 1110 Score = 27.5 bits (58), Expect = 9.7 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 233 HPRSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNG--VIAASTGNHGAA 406 +PR H G++ + E ++Y+ G L+S+ + +G V++ +G GAA Sbjct: 929 YPRKHTNLFGLNPQDRIEAMRYSFQTDTLGY---LLSVLKDLYPDGLRVLSIYSGIGGAA 985 Query: 407 LSYHSTQLGIPCIVVV 454 ++ H + + C+V V Sbjct: 986 IALHRLGIPLQCVVSV 1001 >02_01_0601 + 4465775-4465924,4466070-4466531,4466613-4467445, 4467528-4467597,4467613-4467698,4467865-4468036, 4468481-4468519,4469410-4469430 Length = 610 Score = 27.5 bits (58), Expect = 9.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 233 HPRSHVRGLGMDIYFKQEFLQYTGSFKERGV 325 HP RG+G D+ +K QY+ +K+R V Sbjct: 84 HP-GRTRGIGSDVPWKHGLPQYSSQYKKRKV 113 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,018,913 Number of Sequences: 37544 Number of extensions: 355661 Number of successful extensions: 859 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 855 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1608522592 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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