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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0629
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381...    73   1e-13
04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981...    67   1e-11
01_06_0353 - 28647452-28647477,28647568-28649134                       46   3e-05
05_07_0017 + 27070332-27071886,27072238-27072344,27072427-27072531     43   2e-04
04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291,443...    36   0.021
08_01_0245 + 2023442-2023786,2024485-2024841,2024951-2025393,202...    36   0.028
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605...    31   1.0  
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851...    28   7.4  
04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407...    28   7.4  
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257...    27   9.7  
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190...    27   9.7  
02_01_0601 + 4465775-4465924,4466070-4466531,4466613-4467445,446...    27   9.7  

>03_05_0901 +
           28635672-28636094,28637623-28637802,28637903-28638172,
           28638506-28638757,28639205-28639453,28639533-28639606,
           28639798-28639915,28640421-28640555,28640813-28640965
          Length = 617

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 44/122 (36%), Positives = 64/122 (52%)
 Frame = +2

Query: 257 LGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGI 436
           LG++++ K+E LQ   SFK RG  N +  LS EQ + GVI +S GNH   ++  + +LG 
Sbjct: 128 LGVNLWIKREDLQPVFSFKLRGAYNMMAKLSREQLERGVICSSAGNHAQGVALSAQRLGC 187

Query: 437 PCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLGKEKEMILH*TAMDHPDV 616
             ++V+P+ T   K    E+LGA     G     A+ +A     E+E        DHPDV
Sbjct: 188 DAVIVMPVTTPEIKWRSVERLGATVVLKGDSYDEAQSYAKQ-RCEQEGRTFIPPFDHPDV 246

Query: 617 FS 622
            S
Sbjct: 247 IS 248


>04_04_0753 -
           27797298-27797547,27797765-27797951,27798040-27798113,
           27798719-27798949,27799047-27799133,27799244-27799434
          Length = 339

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 33/110 (30%), Positives = 59/110 (53%)
 Frame = +2

Query: 257 LGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGI 436
           +G  ++FK E  Q  G+FK RG  N++ +L D++   GV+  S+GNH AA++  +   GI
Sbjct: 50  VGKQLFFKCECFQKAGAFKIRGASNSIFALDDDEASKGVVTHSSGNHAAAVALAAKLRGI 109

Query: 437 PCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLGKEKEMIL 586
           P  +V+P +    KV+  ++ G       + + + +  A  + +E   IL
Sbjct: 110 PAYIVIPRNAPACKVDNVKRYGGHIIWSDVSIESRESVAKRVQEETGAIL 159


>01_06_0353 - 28647452-28647477,28647568-28649134
          Length = 530

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
 Frame = +2

Query: 239 RSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKK-------NGVIAASTGNH 397
           R H+ G+  D++ K   + +TGSFK+ G+   L+S  +  ++       NGV  ASTG+ 
Sbjct: 180 REHLGGM-TDLWVKHCGISHTGSFKDLGM-TVLVSQVNRLRRAPLSRPINGVGCASTGDT 237

Query: 398 GAALSYHSTQLGIPCIVVVP 457
            AALS +    GIP IV +P
Sbjct: 238 SAALSAYCAAAGIPAIVFLP 257


>05_07_0017 + 27070332-27071886,27072238-27072344,27072427-27072531
          Length = 588

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
 Frame = +2

Query: 239 RSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKN-------GVIAASTGNH 397
           R H+ G+  D++ K   + +TGSFK+ G+   L+S  +  ++        GV  ASTG+ 
Sbjct: 176 RDHLAGMN-DLWVKHCGISHTGSFKDLGM-TVLVSQVNRLRRAPLSRPIAGVGCASTGDT 233

Query: 398 GAALSYHSTQLGIPCIVVVP 457
            AALS +    GIP IV +P
Sbjct: 234 SAALSAYCAAAGIPAIVFLP 253


>04_01_0339 -
           4429742-4429840,4429932-4430012,4430232-4430291,
           4430715-4430794,4430923-4430974,4431045-4431182,
           4431449-4431712,4432031-4432088,4433261-4433370,
           4433604-4433795
          Length = 377

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
 Frame = +2

Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGV-------IAASTGNHGAALS 412
           G G  I  K EFLQ + S K+R    A+  L D +KK  +       I  ++GN G  L+
Sbjct: 80  GCGARIAAKLEFLQPSFSVKDRP---AISMLEDAEKKGLITPGKTTLIEPTSGNMGIGLA 136

Query: 413 YHSTQLGIPCIVVVPIHTALNKVNKCEQLGAK 508
           + +   G   I+ +P +T+L +       GAK
Sbjct: 137 FMAALKGYELILTMPSYTSLERRVTMRAFGAK 168


>08_01_0245 +
           2023442-2023786,2024485-2024841,2024951-2025393,
           2025475-2025569,2026302-2026477
          Length = 471

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = +2

Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNAL--ISLSDEQKKNGVIA-ASTGNHGAALSYHST 424
           G G  IY K+E L +TG+ K   + NA+  + L+    K  +IA    G HG A +    
Sbjct: 147 GTGPMIYLKREDLNHTGAHK---INNAVAQVLLAKRLGKERIIAETGAGQHGVATATVCA 203

Query: 425 QLGIPCIV 448
           + G+ CI+
Sbjct: 204 RFGLQCII 211


>03_02_0162 +
           6053144-6053365,6053474-6053548,6054477-6054623,
           6054749-6055300,6055387-6055622,6055914-6056130
          Length = 482

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +2

Query: 260 GMDIYFKQEFLQYTGSFKER---GVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQL 430
           G +I  K EFL   GS K+R    +    +   D      V   S G+   +L+  +   
Sbjct: 72  GCEILGKAEFLNPGGSVKDRVAVKIIEEALESGDLLCGGTVTEGSAGSTAISLAIVAPAY 131

Query: 431 GIPCIVVVPIHTALNKV 481
           G  C VV+P   A+ KV
Sbjct: 132 GCKCHVVIPDDAAIEKV 148


>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
            35385254-35385372,35385701-35385811,35386068-35386595,
            35386702-35386881,35386957-35387556,35387646-35388066,
            35388183-35388280,35388372-35389260,35389366-35389544,
            35389647-35389763,35389862-35389952,35390578-35390753
          Length = 1901

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +2

Query: 200  TNCRGSSSYTVHPRSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALIS-LSDEQKKNGVI 376
            T+  G  S +V P S  + L     F +   Q +  F      N+L S +      N + 
Sbjct: 1242 TDQTGQRSDSVLPSSKKKSLSFSSSFSKR-TQPSHLFSGNRASNSLKSPVPIGNVDNMIC 1300

Query: 377  AASTGNHGAALSYHSTQLGIP 439
            AAST N G A + H T L +P
Sbjct: 1301 AASTVNTGDAETSHKTPLSLP 1321


>04_03_0574 -
           17338777-17339077,17339390-17340222,17340304-17340765,
           17340843-17341030,17341244-17341576,17341665-17341796,
           17342604-17342643
          Length = 762

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 233 HPRSHVRGLGMDIYFKQEFLQYTGSFKERGV 325
           HP S  RG+G D+ +K    QY+  +++R V
Sbjct: 265 HP-SRTRGIGSDVPWKHGLPQYSSQYRKRKV 294


>06_01_0358 +
           2573241-2573324,2573509-2573636,2573769-2573971,
           2574129-2574254,2574522-2574680,2574857-2575050,
           2575251-2575376
          Length = 339

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
 Frame = +2

Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKN----GV---IAASTGNHGAALS 412
           G+   I  K E  Q   S K+R   +AL  + D ++K     GV   +  ++GN G  ++
Sbjct: 46  GVNARIVGKLESYQPLCSVKDR---SALRMIEDAEEKGLISPGVTTLVEPTSGNLGIGVA 102

Query: 413 YHSTQLGIPCIVVVPIHTALNKVNKCEQLGAK 508
           Y++   G   + V+P   +L+K      LGA+
Sbjct: 103 YNALLKGYRFVAVMPAEYSLDKQMLLTYLGAE 134


>05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,
            1902740-1902821,1902928-1903054,1903369-1903686,
            1903785-1903846,1903988-1904074,1904139-1904195,
            1906113-1906197,1906916-1907185,1908158-1908254,
            1908390-1908436,1908826-1908939,1909024-1909117,
            1909360-1909457,1910356-1910455,1911445-1911521,
            1911824-1913122
          Length = 1110

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +2

Query: 233  HPRSHVRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNG--VIAASTGNHGAA 406
            +PR H    G++   + E ++Y+      G    L+S+  +   +G  V++  +G  GAA
Sbjct: 929  YPRKHTNLFGLNPQDRIEAMRYSFQTDTLGY---LLSVLKDLYPDGLRVLSIYSGIGGAA 985

Query: 407  LSYHSTQLGIPCIVVV 454
            ++ H   + + C+V V
Sbjct: 986  IALHRLGIPLQCVVSV 1001


>02_01_0601 +
           4465775-4465924,4466070-4466531,4466613-4467445,
           4467528-4467597,4467613-4467698,4467865-4468036,
           4468481-4468519,4469410-4469430
          Length = 610

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 233 HPRSHVRGLGMDIYFKQEFLQYTGSFKERGV 325
           HP    RG+G D+ +K    QY+  +K+R V
Sbjct: 84  HP-GRTRGIGSDVPWKHGLPQYSSQYKKRKV 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,018,913
Number of Sequences: 37544
Number of extensions: 355661
Number of successful extensions: 859
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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