Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0629
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9726| Best HMM Match : PALP (HMM E-Value=1e-19) 53 2e-07
SB_9725| Best HMM Match : GETHR (HMM E-Value=0.00026) 51 9e-07
SB_33312| Best HMM Match : PALP (HMM E-Value=8.2e-21) 50 2e-06
SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05) 42 6e-04
SB_32365| Best HMM Match : PALP (HMM E-Value=0.064) 40 0.002
SB_2393| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_18116| Best HMM Match : PALP (HMM E-Value=0) 40 0.002
SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_45570| Best HMM Match : Euplotes_phero (HMM E-Value=2.6) 29 3.3
SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_12822| Best HMM Match : PARG_cat (HMM E-Value=0.0012) 29 3.3
SB_11397| Best HMM Match : ECSIT (HMM E-Value=1.7e-24) 29 4.3
SB_50992| Best HMM Match : HpcH_HpaI (HMM E-Value=1e-10) 28 5.7
SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8) 28 7.5
SB_52144| Best HMM Match : DUF280 (HMM E-Value=6.3) 28 7.5
SB_6308| Best HMM Match : CDC73 (HMM E-Value=5) 28 7.5
SB_50611| Best HMM Match : LytTR (HMM E-Value=2.6e-23) 27 9.9
SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_9726| Best HMM Match : PALP (HMM E-Value=1e-19)
Length = 337
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2
Query: 353 EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNK 478
EQK+ GVIAAS GNH AL+YH +L IP VV+P + L+K
Sbjct: 71 EQKRRGVIAASAGNHAQALAYHGNKLKIPVTVVMPENAPLSK 112
>SB_9725| Best HMM Match : GETHR (HMM E-Value=0.00026)
Length = 338
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +2
Query: 350 DEQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKFSRHGID 529
+EQK GVI S GNHG AL+ +LGIP +V++P + + KV C + A G +
Sbjct: 162 EEQKGRGVITTSAGNHGLALAQQGDELGIPVMVLLPENVSPLKVKLCNRYNATTKLAGRN 221
Query: 530 MSAAKLHAMSLGKEK 574
+ +HA K K
Sbjct: 222 ATEV-IHARYNAKTK 235
>SB_33312| Best HMM Match : PALP (HMM E-Value=8.2e-21)
Length = 449
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/74 (37%), Positives = 39/74 (52%)
Frame = +2
Query: 353 EQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKFSRHGIDM 532
EQK GVI S GNHG AL+ +LGIP +V++P + + KV C + A G +
Sbjct: 1 EQKGRGVITTSAGNHGLALAQQGDELGIPVMVLLPENVSPLKVKLCNRYNATTKLAGRNA 60
Query: 533 SAAKLHAMSLGKEK 574
+ +HA K K
Sbjct: 61 TEV-IHARYNAKTK 73
>SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05)
Length = 407
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Frame = +2
Query: 260 GMDIYFKQEFLQYTGSFKERGVRNALISL---SDEQKKNG-----VIAASTGNHGAALSY 415
G ++FK E LQ G+FK RG NA++ L SD+ + V+ S+GNH ALS
Sbjct: 128 GRSLFFKCENLQKAGAFKFRGAMNAVLRLVESSDDPSGSKSQAPCVVTHSSGNHAQALSL 187
Query: 416 HSTQLGIPCIVVVP 457
+ + + +V+P
Sbjct: 188 AAKLMNLKAHIVMP 201
>SB_32365| Best HMM Match : PALP (HMM E-Value=0.064)
Length = 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +2
Query: 254 GLGMDIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAASTGNHGAALSYHST 424
GL ++ K EF+ GS K+R GVR + D K G +I ++GN G AL+ S
Sbjct: 7 GLKCEVVAKCEFMNPVGSLKDRIGVRMIEDAERDNHIKPGDTLIEPTSGNTGIALALASA 66
Query: 425 QLGIPCIVVVPIHTALNKVNKCEQLG 502
G C++V+ + +K + + LG
Sbjct: 67 VKGYRCVIVMSEKMSSDKADTQKALG 92
>SB_2393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +2
Query: 254 GLGMDIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAASTGNHGAALSYHST 424
GL ++ K EF GS K+R G+R + + + K G +I ++GN G L+ +
Sbjct: 24 GLKCELLAKCEFFNAGGSVKDRIGLRMIEEAEREGRLKPGDTLIEPTSGNTGIGLALAAA 83
Query: 425 QLGIPCIVVVPIHTALNKVNKCEQLGAKFSR 517
G CI+V+P + KV+ LGA+ R
Sbjct: 84 VKGYRCIIVMPEKMSNEKVDVLRALGAEIVR 114
>SB_18116| Best HMM Match : PALP (HMM E-Value=0)
Length = 470
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +2
Query: 254 GLGMDIYFKQEFLQYTGSFKER-GVRNALISLSDEQKKNG--VIAASTGNHGAALSYHST 424
GL ++ K EF+ GS K+R GVR + D K G +I ++GN G AL+ S
Sbjct: 7 GLKCEVVAKCEFMNPVGSLKDRIGVRMIEDAERDNHIKPGDTLIEPTSGNTGIALALASA 66
Query: 425 QLGIPCIVVVPIHTALNKVNKCEQLG 502
G C++V+ + +K + + LG
Sbjct: 67 VKGYRCVIVMSEKMSSDKADTQKALG 92
>SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 203 NCRGSSSYTVHPRSHVRGLGMDIYFKQEFLQYTGSFKERGVR 328
N ++ +PR+ RG G IY+++ L TGS ER +R
Sbjct: 228 NTLADRKHSCYPRARKRGSGKFIYWRKNCLVGTGSSTERTIR 269
>SB_45570| Best HMM Match : Euplotes_phero (HMM E-Value=2.6)
Length = 388
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -1
Query: 330 FRTPRSLKLPVYCKNSCLK*ISIPSPLTCERGCTVYELLPRQFVLKLPICHH-ILFCVDY 154
F R K K +CL+ S SP T R LLP+ + HH C +Y
Sbjct: 37 FSQSRRCKTTASAKLACLQVDSRGSPTTGRRADIFLSLLPQCTEYSEHMIHHEWCTCTEY 96
Query: 153 LDHSFH 136
+H H
Sbjct: 97 SEHMIH 102
>SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2496
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 286 IFTVYWKFQRTWSPKCADIV 345
+F++ W+ TW P+C DIV
Sbjct: 1458 VFSLAWRHDVTWYPRCHDIV 1477
>SB_12822| Best HMM Match : PARG_cat (HMM E-Value=0.0012)
Length = 290
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 427 TRDTVHSGRTYSYRSQQS*QMRTAR--SEIFKARNRHVSGQITRNEFREGKGNDFTLNGY 600
TR S ++YS S S +R + +E + R+ +SG + + EG G+D T+
Sbjct: 21 TRQRSSSNKSYSSMSGPSDPIRRRQLLAEAAERRSNAISGVASPDVGSEGTGSDVTVEPC 80
Query: 601 GSS 609
GSS
Sbjct: 81 GSS 83
>SB_11397| Best HMM Match : ECSIT (HMM E-Value=1.7e-24)
Length = 316
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +3
Query: 81 MKIYS*NLQIKMSVDIEFDENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSEDW 260
++++ N ++ S + N + I+YD L ASR++ + P ++ S D
Sbjct: 5 LRLFRRNFRVSKSFGLRTFCLIQRRNAKTIRYDQQLLASRKVCISSKENPASKHDQSMDP 64
Query: 261 EWIFISNRNFYSILEVSKNVESEMR 335
I S R+ +E K++ S++R
Sbjct: 65 PEIENSERSSLQQME-GKDLHSDIR 88
>SB_50992| Best HMM Match : HpcH_HpaI (HMM E-Value=1e-10)
Length = 679
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 401 AALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLG 502
A+LS +G +P+HT +NKVN +Q+G
Sbjct: 562 ASLSNTGYDIGNVLYEELPVHTNINKVNPGDQIG 595
>SB_36481| Best HMM Match : DUF922 (HMM E-Value=1.8)
Length = 1150
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 585 KIISFSFPKLIACNLAADMSIPCLENFAPS 496
K I F F K I ++ MSIPC+EN S
Sbjct: 281 KTIHFKFFKNIFKDVRQGMSIPCIENLLDS 310
>SB_52144| Best HMM Match : DUF280 (HMM E-Value=6.3)
Length = 305
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 585 KIISFSFPKLIACNLAADMSIPCLENFAPS 496
K I F F K I ++ MSIPC+EN S
Sbjct: 177 KTIHFKFFKNIFKDVRQGMSIPCIENLLDS 206
>SB_6308| Best HMM Match : CDC73 (HMM E-Value=5)
Length = 388
Score = 27.9 bits (59), Expect = 7.5
Identities = 29/111 (26%), Positives = 43/111 (38%)
Frame = +2
Query: 248 VRGLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQ 427
+R L DI ++ +GS + R +AL +L+ + + G LSY
Sbjct: 103 LRRLAADIAKGVSHVKNSGSNENRAAFSALKNLAFGENVKKCVTL-----GVFLSYKK-- 155
Query: 428 LGIPCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLGKEKEM 580
G P P H L +V K + G K R I HA + +E M
Sbjct: 156 -GFPECEQEPQHAGLGRVPKSQYNGYKVIRCAIAADVCHFHAEASSRENVM 205
>SB_50611| Best HMM Match : LytTR (HMM E-Value=2.6e-23)
Length = 179
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +3
Query: 162 RKIKYDDILAASRRIVGA--VVRTPCTRAHMSEDWEWIFI-SNRNFYSI-LEVSKNVES 326
+ I +D L A + +G + TP R +++E+ E+IF+ S+R I + +VES
Sbjct: 43 KPISFDRFLQAVNKFIGENIPIETPTIRENVAEESEFIFVRSDRKMIKIDFDAILHVES 101
>SB_34041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -3
Query: 406 CCTMISSRRCYNTIFLLFVTQRYQRISDSTFFETSSIL*KFLFEINIHSQSSDM*ARVHG 227
CC + C N I L+FV + + F + N+ SQSS+ AR+
Sbjct: 328 CCIPDVATECQNPIDLIFVLDSSGSVGPANFQSAKDFIATLCQRFNV-SQSSESGARIAL 386
Query: 226 VR 221
+R
Sbjct: 387 IR 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,167,149
Number of Sequences: 59808
Number of extensions: 433309
Number of successful extensions: 1048
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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