Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0629
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p pro... 123 2e-28
AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,... 123 2e-28
AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p pro... 45 1e-04
AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB... 45 1e-04
AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA... 45 1e-04
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 29 5.4
>AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p
protein.
Length = 469
Score = 123 bits (297), Expect = 2e-28
Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 209 RGSSSYTVHPRSHVRGL-GMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAAS 385
RG T P+S L GM++Y K++FLQYTGSFKERG R AL+SL++EQK+ GVI+AS
Sbjct: 72 RGGVERTPCPKSTSSDLYGMELYLKKDFLQYTGSFKERGARYALLSLTEEQKRTGVISAS 131
Query: 386 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLG 565
GNH AL YH +L IP VV+P + K+ KC A+ G DM AK AM +
Sbjct: 132 LGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQKCRNYKARVIVDGNDMGEAKSLAMRMS 191
Query: 566 KEKEMILH*TAMDHPDVFS 622
+E E +L+ DHP + +
Sbjct: 192 RE-EGLLYVNGYDHPHIMA 209
Score = 37.9 bits (84), Expect = 0.012
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 135 DENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSE 254
D C+P P++I + D+ +A+ I G V RTPC ++ S+
Sbjct: 48 DPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSD 87
>AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,
isoform B protein.
Length = 469
Score = 123 bits (297), Expect = 2e-28
Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +2
Query: 209 RGSSSYTVHPRSHVRGL-GMDIYFKQEFLQYTGSFKERGVRNALISLSDEQKKNGVIAAS 385
RG T P+S L GM++Y K++FLQYTGSFKERG R AL+SL++EQK+ GVI+AS
Sbjct: 72 RGGVERTPCPKSTSSDLYGMELYLKKDFLQYTGSFKERGARYALLSLTEEQKRTGVISAS 131
Query: 386 TGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKFSRHGIDMSAAKLHAMSLG 565
GNH AL YH +L IP VV+P + K+ KC A+ G DM AK AM +
Sbjct: 132 LGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQKCRNYKARVIVDGNDMGEAKSLAMRMS 191
Query: 566 KEKEMILH*TAMDHPDVFS 622
+E E +L+ DHP + +
Sbjct: 192 RE-EGLLYVNGYDHPHIMA 209
Score = 37.9 bits (84), Expect = 0.012
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 135 DENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSE 254
D C+P P++I + D+ +A+ I G V RTPC ++ S+
Sbjct: 48 DPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSD 87
>AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p
protein.
Length = 522
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG--VIAASTGNHGAALSYHS 421
G+ ++Y K EFL GS K+R + ++ ++EQ K G +I ++GN G L+
Sbjct: 69 GIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMAC 127
Query: 422 TQLGIPCIVVVPIHTALNKVNKCEQLGAKFSR 517
G CI+V+P + KV+ LGAK R
Sbjct: 128 AVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB,
isoform B protein.
Length = 522
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG--VIAASTGNHGAALSYHS 421
G+ ++Y K EFL GS K+R + ++ ++EQ K G +I ++GN G L+
Sbjct: 69 GIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMAC 127
Query: 422 TQLGIPCIVVVPIHTALNKVNKCEQLGAKFSR 517
G CI+V+P + KV+ LGAK R
Sbjct: 128 AVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA,
isoform A protein.
Length = 522
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 254 GLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG--VIAASTGNHGAALSYHS 421
G+ ++Y K EFL GS K+R + ++ ++EQ K G +I ++GN G L+
Sbjct: 69 GIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMAC 127
Query: 422 TQLGIPCIVVVPIHTALNKVNKCEQLGAKFSR 517
G CI+V+P + KV+ LGAK R
Sbjct: 128 AVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 29.1 bits (62), Expect = 5.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 564 PKLIACNLAADMSIPCLENFAPSCS 490
P ++CNLA + +PC F +C+
Sbjct: 221 PACVSCNLAPHLPVPCTRIFCANCT 245
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,905,244
Number of Sequences: 53049
Number of extensions: 618442
Number of successful extensions: 1278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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