Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0626
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 160 5e-40
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 156 9e-39
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 9e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 152 2e-37
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 85 3e-17
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 66 1e-11
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 65 3e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 64 5e-11
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 64 6e-11
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 44 7e-05
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 41 5e-04
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 40 0.001
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.001
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 36 0.025
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.24
SB_52584| Best HMM Match : FAD_binding_5 (HMM E-Value=2.3e-09) 30 0.95
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 29 1.7
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.9
SB_45544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 3.8
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_56440| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 28 5.1
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 28 5.1
SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_47407| Best HMM Match : RnaseH (HMM E-Value=5.9) 27 6.7
SB_29850| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_22266| Best HMM Match : Dimerisation (HMM E-Value=4.3) 27 6.7
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 27 6.7
SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 27 6.7
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_13898| Best HMM Match : DUF987 (HMM E-Value=3.4) 27 8.9
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 160 bits (389), Expect = 5e-40
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 219
FKMREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK
Sbjct: 212 FKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 271
Query: 220 YVPRAILVDLEPG 258
YVPRA+LVDLEPG
Sbjct: 272 YVPRAVLVDLEPG 284
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 284 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 321
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AELVDSVLDVVRKEAE CDCLQGFQLTHS
Sbjct: 317 GHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHS 351
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 156 bits (379), Expect = 9e-39
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 226 PRAILVDLEPG 258
PRAILVDLEPG
Sbjct: 61 PRAILVDLEPG 71
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AELVDSVLDVVRKEAE CDCLQGFQLTHS
Sbjct: 104 GHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHS 138
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 156 bits (379), Expect = 9e-39
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIVH QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 226 PRAILVDLEPG 258
PRAILVDLEPG
Sbjct: 61 PRAILVDLEPG 71
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVF 320
GTMDSVRSGPFGQIFRPDNFVF
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 152 bits (368), Expect = 2e-37
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREIV +QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 226 PRAILVDLEPG 258
PR++L+DLEPG
Sbjct: 61 PRSVLIDLEPG 71
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE CDC+QGFQLTHS
Sbjct: 104 GHYTEGAELMDSVLDVVRKEAESCDCIQGFQLTHS 138
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVRSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 16 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 53
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AELVDSVLDVVRKEAE CDC+QGFQLTHS
Sbjct: 49 GHYTEGAELVDSVLDVVRKEAESCDCIQGFQLTHS 83
Score = 35.1 bits (77), Expect = 0.034
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 214 GKYVPRAILVDLEPG 258
GKYVPRA+LVDLEPG
Sbjct: 2 GKYVPRAVLVDLEPG 16
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQ--LERINVYYNEATGGK 219
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMD+VR GP G +FRPDNFV QSGA NN AKGHY+E
Sbjct: 27 GTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSE 64
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQL 448
G AEL+D++ DV+RKEAE CDC+QG QL
Sbjct: 60 GHYSEGAELIDNIFDVLRKEAENCDCMQGVQL 91
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 208 TGGKYVPRAILVDLEPG 258
TGG+YVPR+ILVDLEPG
Sbjct: 11 TGGRYVPRSILVDLEPG 27
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
++ RE + I GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 214 GKYVPRAILVDLEP 255
GK+VPRA+ VDLEP
Sbjct: 492 GKHVPRAVFVDLEP 505
Score = 44.4 bits (100), Expect = 5e-05
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ V G+ A NN A+GHYT
Sbjct: 75 VDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYT 109
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 508 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 542
Score = 34.7 bits (76), Expect = 0.044
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E+VD VLD +RK A+ C LQGF + HS
Sbjct: 113 EIVDLVLDRIRKLADQCTGLQGFLIFHS 140
Score = 34.7 bits (76), Expect = 0.044
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E+VD VLD +RK A+ C LQGF + HS
Sbjct: 546 EIVDLVLDRIRKLADQCTGLQGFLIFHS 573
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 31 FIPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 204
FI RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 60 FILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 119
Query: 205 ATGGKYVPRAILVDLEP 255
GK+VPRA+ VDLEP
Sbjct: 120 TGAGKHVPRAVFVDLEP 136
Score = 65.3 bits (152), Expect = 3e-11
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +1
Query: 22 KSVFIPFK--MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERIN 189
++VF+ + +RE + I GQ G QIG WE+ EHGI P G D + + N
Sbjct: 576 RAVFVDLEPTVRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFN 635
Query: 190 VYYNEATGGKYVPRAILVDLEP 255
+++E GK+VPRA+ VDLEP
Sbjct: 636 TFFSETGAGKHVPRAVFVDLEP 657
Score = 63.7 bits (148), Expect = 8e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 222
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 223 VPRAILVDLEP 255
VPRA+ VDLEP
Sbjct: 574 VPRAVFVDLEP 584
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 139 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 173
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 660 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 694
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
EL+D VLD +RK A+ C LQGF + HS
Sbjct: 698 ELIDLVLDRIRKLADQCTGLQGFLIFHS 725
Score = 34.7 bits (76), Expect = 0.044
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E+VD VLD +RK A+ C LQGF + HS
Sbjct: 177 EIVDLVLDRIRKLADQCTGLQGFLIFHS 204
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E++D VLD RK A+ C LQGF + HS
Sbjct: 113 EIIDLVLDRCRKLADQCTGLQGFLIFHS 140
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 64.1 bits (149), Expect = 6e-11
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 31.9 bits (69), Expect = 0.31
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 380 VDSVLDVVRKEAEGCDCLQGFQLTHS 457
VD VLD +RK A+ C LQGF + HS
Sbjct: 105 VDQVLDRLRKLADQCSGLQGFFIFHS 130
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 303 PDNFVFGQSGAGNNXAKGHYT 365
P+ + G+ A NN A+GHYT
Sbjct: 79 PEQLITGKEDAANNYARGHYT 99
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 63.7 bits (148), Expect = 8e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGKY 222
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 223 VPRAILVDLEP 255
VPRA+ VDLEP
Sbjct: 61 VPRAVFVDLEP 71
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 74 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 108
Score = 34.3 bits (75), Expect = 0.059
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E++D VLD +RK A+ C LQGF + HS
Sbjct: 112 EIIDLVLDRIRKLADQCTGLQGFLIFHS 139
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 63.7 bits (148), Expect = 8e-11
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
F RE + I GQ G QIG WE+ EHGI P G D + + N ++ E
Sbjct: 370 FWQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGA 429
Query: 214 GKYVPRAILVDLEP 255
GK+VPRA+ VDLEP
Sbjct: 430 GKHVPRAVFVDLEP 443
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
++ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 214 GKYVPRAILVDLEP 255
GK+VPRA+ DLEP
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 446 IDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 480
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 879 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 913
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E +D VLD +RK A+GC LQGF + HS
Sbjct: 484 EQIDIVLDRLRKLADGCTGLQGFLIFHS 511
Score = 34.3 bits (75), Expect = 0.059
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E++D VLD +RK A+ C LQGF + HS
Sbjct: 917 EMIDLVLDRIRKLADQCTGLQGFLIFHS 944
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 63.7 bits (148), Expect = 8e-11
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 FKMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATG 213
++ RE V I GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 214 GKYVPRAILVDLEP 255
GK+VPRA+ VDLEP
Sbjct: 477 GKHVPRAVFVDLEP 490
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 IGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGKYVPRAILVDLEP 255
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 94
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D +R+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 493 IDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYT 527
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 380 VDSVLDVVRKEAEGCDCLQGFQLTHS 457
+D+VLD +RK A+ C LQGF + HS
Sbjct: 533 IDNVLDRIRKLADQCSGLQGFLVFHS 558
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
+L++ VLD +RK A+ C LQGF + HS
Sbjct: 98 QLIEIVLDRLRKLADQCTGLQGFLIFHS 125
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ DLEP
Sbjct: 61 HVPRAVFCDLEP 72
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E++D+VLD +RK A+GC LQGF + HS
Sbjct: 113 EMIDTVLDRLRKLADGCTGLQGFLIFHS 140
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER----INVYYNEATG 213
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 214 GKY 222
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 103 FWEVISDEHGIDPTGTYHG-DSDLQLERINVYYNE 204
FWEVI++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DS +D +RK AE CD +QGFQ+ HS
Sbjct: 12 GFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHS 46
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 264 DSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
D VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 46
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
EL+D VLD +RK A+ C LQGF + HS
Sbjct: 50 ELIDLVLDRIRKLADQCTGLQGFLIFHS 77
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D +R+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 40 IDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 74
Score = 34.7 bits (76), Expect = 0.044
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 178 ERINVYYNEATGGKYVPRAILVDLEP 255
+ N ++ E GK+VPRA+ VDLEP
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E +D LD +RK A+ C LQGF + HS
Sbjct: 78 EHIDLALDRIRKLADQCTGLQGFLIFHS 105
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 270 VRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYT 34
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
EL+D VLD +RK A+ C LQGF + HS
Sbjct: 38 ELIDLVLDRIRKLADQCTGLQGFLIFHS 65
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 270 VRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
VR+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYT 34
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 270 VRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
VR G + +F PD + G+ A NN A+GHYT
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYT 34
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+D VR+G + ++ P+ + G+ A NN A+GHYT
Sbjct: 986 IDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYT 1020
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 199 NEATGGKYVPRAILVDLEP 255
+EA GKYVPRA+LVDLEP
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
Score = 31.9 bits (69), Expect = 0.31
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E+V+ V+D +RK + C LQGF + HS
Sbjct: 1024 EMVEVVMDKIRKMTDQCSGLQGFLIFHS 1051
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 270 VRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYT 365
+R+G + Q+F P+ + G+ A NN A+GHYT
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 34
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
E +D LD +RK A+ C LQGF + HS
Sbjct: 38 EHIDLALDRIRKLADQCTGLQGFLIFHS 65
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 35.5 bits (78), Expect = 0.025
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 401 VRKEAEGCDCLQGFQLTHS 457
+RKEAE CD +QGFQL HS
Sbjct: 1 MRKEAEDCDAIQGFQLLHS 19
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 299 PSGQLCLWAIGCWQQLG*GSLHRSAELVDSVLDVVRKEAEGCDCLQGF 442
P GQ G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 55 IVHIQAGQCGNQIGAKFWEVISDE 126
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_52584| Best HMM Match : FAD_binding_5 (HMM E-Value=2.3e-09)
Length = 215
Score = 30.3 bits (65), Expect = 0.95
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = -2
Query: 282 VPSVQSPLSRLQVHKDSPRHVLSSGRLVIVHVDALQ--LEVGVSVIRSRRIDAML---IG 118
+ S ++ L +Q++++SP +L+SGRL + +L+ L++ +RR+ M+ I
Sbjct: 9 IGSTKTRLHPVQLNEESPAEILNSGRLTWLRPSSLEQCLKLADEYPNARRVSGMIGAAIS 68
Query: 117 YNFPELSSNLIAALTGLYVYNFPHFKWNK 31
+ P+ +A L+ +V WN+
Sbjct: 69 SSVPD--DQHVAILSLAHVPELNAVDWNE 95
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++S +
Sbjct: 710 KRVEAIVEAPAPTNQSEVRSFLGSAQFSAK 739
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 115 ISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILVDLEPGQ 261
+ D G GD L L + +Y E G + V R + LEP Q
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEPKQ 840
>SB_45544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -3
Query: 338 ASTRLPKDKVVRTEDLTEWSRAYRVHCPGSRSTRIARGT 222
+S+ +++ +E+ E+S+ +H P S S RI +GT
Sbjct: 5 SSSSSDENEGYESEEFAEYSKVQSIHSPRSSSGRIEKGT 43
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 22 KSVFIPFKMREIVHIQAGQCGNQIGAKFWEVISDE---HGIDPTGTYHGDSDLQLERINV 192
KS +RE++ +Q G N +G +W + G P + D L E + V
Sbjct: 19 KSKMADATVREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTV 77
Query: 193 YYNEATGGKYVPRAILVDLE 252
E Y PR +L DL+
Sbjct: 78 TGQET----YTPRLLLYDLK 93
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 356 SLHRSAELVDSVLDVVRKEAEGCDCLQGFQL 448
SL+ D+ D +R AE CD LQGFQ+
Sbjct: 211 SLYNDESFRDNFEDGLRFFAEECDRLQGFQI 241
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 289 PNGPERTESIVPAPGPQG*PEARTFLRSPRY 197
P G E+ ++V AP P E R+FL +Y
Sbjct: 639 PGGQEKVRAVVDAPAPTNVTELRSFLGMLQY 669
>SB_56440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 322 PKTKLSGRKI*PNGPERTESIVPAPGPQ 239
P L+GRK PN P + P P PQ
Sbjct: 343 PNPPLNGRKSNPNPPHNGPKVHPQPSPQ 370
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 356 SLHRSAELVDSVLDVVRKEAEGCDCLQGFQL 448
SL+ D+ D +R AE CD LQGFQ+
Sbjct: 211 SLYNDESFRDNFEDGLRFFAEECDRLQGFQI 241
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 22 KSVFIPFKMREIVHIQAGQCGNQIGAKFWEVISDEHGID---PTGTYHGDSDLQLERINV 192
KS +RE++ +Q G N +G +W + D P + D L E + V
Sbjct: 19 KSKMADATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTV 77
Query: 193 YYNEATGGKYVPRAILVDLE 252
E Y PR +L DL+
Sbjct: 78 TGQET----YTPRLLLYDLK 93
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 164 PTSSWSASTCTITRRPEESTC 226
PT SW+ TC I+ + +S C
Sbjct: 1775 PTGSWTCDTCWISNKEADSRC 1795
>SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 139 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 168
>SB_47407| Best HMM Match : RnaseH (HMM E-Value=5.9)
Length = 271
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 18 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 47
>SB_29850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 84 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 113
>SB_22266| Best HMM Match : Dimerisation (HMM E-Value=4.3)
Length = 290
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 70 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 99
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 900 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 929
>SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 667
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 401 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 430
>SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 84 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 113
>SB_27599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2937
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 344 VVASTRLPKDKVVRTEDLTEWSRAYRVHCPGSRSTRIARGTYFPPV 207
+V TRLP D + E+ W R Y+ C G +A GT P+
Sbjct: 1236 LVVKTRLPSDGTSKYEN---WCRDYQKLCEGFGWRPLACGTDMRPI 1278
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 616 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 645
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 277 ERTESIVPAPGPQG*PEARTFLRSPRYSTR 188
+R E+IV AP P E R+FL S ++ +
Sbjct: 216 KRVEAIVEAPAPTNQSEVRSFLGSAQFCAK 245
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 366 RCSDP*PSCCQHPIAQRQSCPDGRSDRMVPS-VQSPLSRLQVHKDSPRH 223
+CS+P +C + + CPD PS + + L+R +V +PRH
Sbjct: 719 QCSNPMSACPPFSLLRPHKCPDPEFRHYAPSNITTRLTRREV---TPRH 764
>SB_13898| Best HMM Match : DUF987 (HMM E-Value=3.4)
Length = 421
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = -3
Query: 320 KDKVVRTEDLTEWSRAYR 267
+D++ T+DLT+W+R Y+
Sbjct: 216 RDRLPSTQDLTDWARVYQ 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,262,678
Number of Sequences: 59808
Number of extensions: 356527
Number of successful extensions: 994
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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