Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0626
(508 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 137 3e-33
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 135 2e-32
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 134 4e-32
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 134 4e-32
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 133 6e-32
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 133 7e-32
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 131 3e-31
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 128 2e-30
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 128 2e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 5e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 5e-13
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 71 6e-13
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 69 1e-12
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 69 1e-12
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 67 7e-12
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 67 7e-12
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 64 4e-11
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 64 4e-11
At4g37190.1 68417.m05265 expressed protein 34 0.048
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.59
At4g11390.1 68417.m01837 DC1 domain-containing protein contains ... 29 2.4
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 4.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 4.2
At2g07180.1 68415.m00822 protein kinase, putative contains prote... 27 5.5
At3g42670.1 68416.m04437 SNF2 domain-containing protein / helica... 27 7.3
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 7.3
At2g28220.1 68415.m03426 aspartyl protease family protein contai... 27 7.3
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 27 9.6
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 137 bits (332), Expect = 3e-33
Identities = 59/72 (81%), Positives = 68/72 (94%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 222
MREI+H+Q GQCGNQIG+KFWEVI DEHG+DPTG Y+GDS DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 223 VPRAILVDLEPG 258
VPRA+L+DLEPG
Sbjct: 61 VPRAVLMDLEPG 72
Score = 83.4 bits (197), Expect = 8e-17
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDS+RSGP+GQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 72 GTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTE 109
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+D+VLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 105 GHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHS 139
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 135 bits (326), Expect = 2e-32
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV+ DEHGIDPTG Y G+SDLQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 226 PRAILVDLEPG 258
PRAIL+DLEPG
Sbjct: 61 PRAILMDLEPG 71
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVR+GP+GQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+D+VLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHS 138
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (323), Expect = 4e-32
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 80.6 bits (190), Expect = 6e-16
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDS+RSGP+GQ FRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (323), Expect = 4e-32
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 80.6 bits (190), Expect = 6e-16
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDS+RSGP+GQ FRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 133 bits (322), Expect = 6e-32
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 83.8 bits (198), Expect = 6e-17
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDS+RSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE DCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHS 138
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 133 bits (321), Expect = 7e-32
Identities = 59/72 (81%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGD-SDLQLERINVYYNEATGGKY 222
MREI+HIQ GQCGNQIG+KFWEVI DEHGID TG Y GD +DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 223 VPRAILVDLEPG 258
VPRA+L+DLEPG
Sbjct: 61 VPRAVLMDLEPG 72
Score = 84.6 bits (200), Expect = 3e-17
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDS+RSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 72 GTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 109
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+D+VLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 105 GHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHS 139
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 131 bits (316), Expect = 3e-31
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 83.8 bits (198), Expect = 6e-17
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDS+RSGPFGQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (310), Expect = 2e-30
Identities = 55/71 (77%), Positives = 65/71 (91%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 83.8 bits (198), Expect = 6e-17
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVRSGP+GQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 128 bits (309), Expect = 2e-30
Identities = 54/71 (76%), Positives = 64/71 (90%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 225
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y G++DLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 226 PRAILVDLEPG 258
PRA+L+DLEPG
Sbjct: 61 PRAVLMDLEPG 71
Score = 83.8 bits (198), Expect = 6e-17
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 GTMDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTE 368
GTMDSVRSGP+GQIFRPDNFVFGQSGAGNN AKGHYTE
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +2
Query: 353 GSLHRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
G AEL+DSVLDVVRKEAE CDCLQGFQ+ HS
Sbjct: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHS 138
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
Score = 33.9 bits (74), Expect = 0.063
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 362 HRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
H+ + + ++D++ +EA+G D L+GF L HS
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCHS 140
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 49 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 228
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 229 RAILVDLEP 255
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
Score = 33.9 bits (74), Expect = 0.063
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 362 HRSAELVDSVLDVVRKEAEGCDCLQGFQLTHS 457
H+ + + ++D++ +EA+G D L+GF L HS
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCHS 140
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.5 bits (165), Expect = 6e-13
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P GT DS + + N +++E + G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ +DLEP
Sbjct: 61 HVPRAVFLDLEP 72
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEAR 374
+D VR+G + Q+F P+ + G+ A NN A+GHYT R
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGR 112
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD+ L+ +RK A+ C LQGF
Sbjct: 113 EIVDTCLERLRKLADNCTGLQGF 135
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEARSW*ILC 392
+D VR+G + Q+F P+ + G+ A NN A+GHYT + LC
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD LD VRK A+ C LQGF
Sbjct: 113 EIVDLCLDRVRKLADNCTGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 219
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEARSW*ILC 392
+D VR+G + Q+F P+ + G+ A NN A+GHYT + LC
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD LD VRK A+ C LQGF
Sbjct: 113 EIVDLCLDRVRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 66.9 bits (156), Expect = 7e-12
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEARSW*ILC 392
+D VR+G + Q+F P+ + G+ A NN A+GHYT + LC
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD LD +RK A+ C LQGF
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 66.9 bits (156), Expect = 7e-12
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEARSW*ILC 392
+D VR+G + Q+F P+ + G+ A NN A+GHYT + LC
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD LD +RK A+ C LQGF
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEARSW*ILC 392
+D VR+G + Q+F P+ + G+ A NN A+GHYT + LC
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD LD +RK A+ C LQGF
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 219
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 220 YVPRAILVDLEP 255
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 261 MDSVRSGPFGQIFRPDNFVFGQSGAGNNXAKGHYTEARSW*ILC 392
+D VR+G + Q+F P+ + G+ A NN A+GHYT + LC
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 374 ELVDSVLDVVRKEAEGCDCLQGF 442
E+VD LD +RK A+ C LQGF
Sbjct: 113 EIVDLCLDRIRKLADNCTGLQGF 135
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 34.3 bits (75), Expect = 0.048
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +1
Query: 46 MREIVHIQAGQCGNQIGAKFWEVISDEHGI------DPTGTYHG-DSDLQLERINVYYNE 204
MREIV IQ G+ N +G+ FW + G+ DP H D D+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 205 ATGGKYVPRAILVDLEPGQWTLYAR 279
AT Y PR + V+L+ T+ +R
Sbjct: 61 AT---YTPRLVSVNLKGALGTMSSR 82
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 0.59
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 377 LVDSVLDVVRKEAEGCDCLQGFQLTHS 457
+++SV VVRKEAE C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At4g11390.1 68417.m01837 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 514
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 184 INVYYNEATGGKYVPRAILVDLEPGQWTLYARDHSVRSSVRTTLSLGN 327
+++ Y E GKY +L P W ++DH R+S+ T LG+
Sbjct: 320 LSLCYGEKASGKYWCDICEKELNPSTWFYTSKDH--RASLHTKCVLGD 365
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 94 GAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILV 243
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 52 EIVHIQAGQCGNQIGAKFWEVISD 123
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g07180.1 68415.m00822 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 442
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 368 FGVVTLSXVVASTRLPKDKVVRTEDLTEWSRAYRVH 261
FGV+ L ++ + K + R +L EW+R H
Sbjct: 283 FGVLLLEMLLGKRAMDKSRACREHNLVEWARPLLNH 318
>At3g42670.1 68416.m04437 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|P41410
DNA repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1256
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 146 ERITETPTSSW-SASTCTITRRPEESTCL 229
+R ETP W A +I R+P ES CL
Sbjct: 86 QRDEETPEPVWVDARVLSIERKPHESECL 114
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 67 QAGQCGNQIGAKFWEVISDEHGIDPTGTYHG 159
QA G IG ++W +IS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At2g28220.1 68415.m03426 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 756
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 118 SDEHGIDPTGTYH--GDSDLQLERINVYYNEATGG 216
SD I P T H G +DL L++ N+Y TGG
Sbjct: 674 SDTIDIFPVITMHFSGGADLVLDKYNMYLETITGG 708
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 368 FGVVTLSXVVASTRLPKDKVVRTEDLTEWSR 276
FGVV L + A + K + R +L EW+R
Sbjct: 277 FGVVLLEMLTARKAVEKYRAQRGRNLVEWAR 307
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,261,206
Number of Sequences: 28952
Number of extensions: 249218
Number of successful extensions: 748
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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