Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0625
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate 5-ki...    33   0.14 
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki...    31   0.58 
At3g07960.1 68416.m00973 phosphatidylinositol-4-phosphate 5-kina...    30   1.0  
At2g12900.1 68415.m01408 hypothetical protein similar to transcr...    29   2.4  
At5g13220.3 68418.m01518 expressed protein                             28   5.4  
At5g13220.2 68418.m01517 expressed protein                             28   5.4  
At5g13220.1 68418.m01519 expressed protein                             28   5.4  
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca...    27   7.2  
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca...    27   7.2  
At3g11420.1 68416.m01393 fringe-related protein similar to hypot...    27   9.5  
At1g26680.1 68414.m03250 transcriptional factor B3 family protei...    27   9.5  

>At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 752

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 594 IEGSGQIIYPS-YRYHGSWVKGMPKGTG 514
           I G G +++P+  RY G W  G+PKG G
Sbjct: 205 ISGKGLLVWPNGNRYEGLWENGIPKGNG 232


>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -2

Query: 588 GSGQIIYPS-YRYHGSWVKGMPKGTG 514
           G G + +P+  RY G W  G+PKG+G
Sbjct: 208 GKGVLAWPNGNRYEGQWENGVPKGSG 233


>At3g07960.1 68416.m00973 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 715

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 594 IEGSGQIIYPS-YRYHGSWVKGMPKGTG 514
           + G+G +I+ +  RY GSW  G PKG G
Sbjct: 156 MNGNGTMIWSNGNRYDGSWEDGAPKGNG 183


>At2g12900.1 68415.m01408 hypothetical protein similar to
           transcription factor(bZIP family) VSF-1 GI:3425907 from
           [Lycopersicon esculentum]
          Length = 264

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 260 FDPSLTNESVETDLLVFEPPSLAPEYEGQDDNDSWL 153
           F PS   ES ++ + V + PSL P  +G++D  SWL
Sbjct: 46  FSPSAPVESRDSSIKVNKNPSLPPLVDGEED-ASWL 80


>At5g13220.3 68418.m01518 expressed protein
          Length = 185

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = -3

Query: 236 SVETDLLVFEPPSLAPEYEGQD-DNDSWLLHR---QKFLEETEQK 114
           S+ETDL V  P +L P+  GQ+ + D  +  R   Q+FLE+ +++
Sbjct: 141 SMETDLSVILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185


>At5g13220.2 68418.m01517 expressed protein
          Length = 185

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = -3

Query: 236 SVETDLLVFEPPSLAPEYEGQD-DNDSWLLHR---QKFLEETEQK 114
           S+ETDL V  P +L P+  GQ+ + D  +  R   Q+FLE+ +++
Sbjct: 141 SMETDLSVILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185


>At5g13220.1 68418.m01519 expressed protein
          Length = 197

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
 Frame = -3

Query: 236 SVETDLLVFEPPSLAPEYEGQD-DNDSWLLHR---QKFLEETEQK 114
           S+ETDL V  P +L P+  GQ+ + D  +  R   Q+FLE+ +++
Sbjct: 141 SMETDLSVILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185


>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
           Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
          Length = 759

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 182 EGQDDNDSWLLHRQKFLEETEQK 114
           E +DD++    HRQK LEE E +
Sbjct: 130 ESKDDDEELSAHRQKMLEEIEHE 152


>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
           Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
          Length = 755

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 182 EGQDDNDSWLLHRQKFLEETEQK 114
           E +DD++    HRQK LEE E +
Sbjct: 130 ESKDDDEELSAHRQKMLEEIEHE 152


>At3g11420.1 68416.m01393 fringe-related protein similar to
           hypothetical protein GB:AAC23643 [Arabidopsis thaliana] 
           + weak similarity to Fringe [Schistocerca
           gregaria](GI:6573138);Fringe encodes an extracellular
           protein that regulates Notch signalling.
          Length = 505

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 184 TKVKTIMILGCCTGKSSWRKLSRRIRCWEIM 92
           TKVK I++    T    W K  RR +C E+M
Sbjct: 451 TKVKRILVTSMKTDPEYWNKAPRR-QCCEVM 480


>At1g26680.1 68414.m03250 transcriptional factor B3 family protein
           low similarity to reproductive meristem gene 1 from
           [Brassica oleracea var. botrytis] GI:3170424,
           [Arabidopsis thaliana] GI:13604227; contains Pfam
           profile PF02362: B3 DNA binding domain
          Length = 920

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +3

Query: 189 WG*RWWF--EHQKVCFHTFVCQGWIESCTGRGTGSG 290
           WG  W    +H K    T + +GW   C G G  +G
Sbjct: 767 WGREWKLVLKHYKSNCFTIIKRGWTSFCQGNGLKAG 802


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,689,380
Number of Sequences: 28952
Number of extensions: 220366
Number of successful extensions: 718
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)