Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0624
         (273 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82053-2|CAB04835.1|  365|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z48009-4|CAA88084.1|  329|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    25   7.3  
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U58735-4|AAC48144.1|  479|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AL021469-3|CAA16290.2|  435|Caenorhabditis elegans Hypothetical ...    25   9.7  

>Z82053-2|CAB04835.1|  365|Caenorhabditis elegans Hypothetical
           protein T26E3.2 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 120 SLLQLSRSHWSSGLSPSRRQRPARCSRW*TPSLHDL 227
           ++++  R HW S  SP  RQR     +   PSLH L
Sbjct: 330 AIIRSPRYHWISVESPETRQRFHMAQKQFRPSLHML 365


>Z48009-4|CAA88084.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.6 protein.
          Length = 329

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 121 DXVRXQXQXRCGVLADSILI*SNINVRINVLSXSINKYN 5
           D  + Q   +C V++  +LI S+   R+ V    I+KYN
Sbjct: 134 DYKKKQSAIKCAVISILVLICSSSTGRLIVWDDPIDKYN 172


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = -1

Query: 249 TETTSTNVSREEMEFTTESNVRDVDVGLETAQXTNEIAKAVEAT 118
           TE+TST+      E TTES         ++    +      E+T
Sbjct: 199 TESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTEST 242


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 197 SVVNSISSRLTFVEVVSVGLQLA 265
           S+VN   S LT   +VSV LQLA
Sbjct: 679 SMVNGKVSDLTLSSIVSVALQLA 701


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 197 SVVNSISSRLTFVEVVSVGLQLA 265
           S+VN   S LT   +VSV LQLA
Sbjct: 679 SMVNGKVSDLTLSSIVSVALQLA 701


>U58735-4|AAC48144.1|  479|Caenorhabditis elegans Hypothetical
           protein F20B4.3 protein.
          Length = 479

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 252 PTETTSTNVSREEMEFTTESNVRDVDVGLETAQXT 148
           PT  +  N+ R    F+T + +RD DV   + Q T
Sbjct: 31  PTRDSPINMYRTASPFSTVTRIRDSDVDRWSHQST 65


>AL021469-3|CAA16290.2|  435|Caenorhabditis elegans Hypothetical
           protein Y116A8B.5 protein.
          Length = 435

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 125 STAFAISLVXWAVSKPTSTSRTLLSVVNSISSRLTFV 235
           ST  + +    AVS    TSRT L +V +IS  + F+
Sbjct: 4   STIISTTTTPPAVSNEDDTSRTTLKLVLAISYLVLFI 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,752,119
Number of Sequences: 27780
Number of extensions: 65369
Number of successful extensions: 162
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)