Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0624
         (273 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   1.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   2.8  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    20   6.4  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    20   6.4  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 92  MRSSCRFHINLIKYKCEN*CIKXKY 18
           + S  + H N+ +Y+C N     KY
Sbjct: 32  LNSHLKSHSNVYQYRCANCTYATKY 56


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 267 EASCKPTETTSTNVSREEMEFTT 199
           EAS     +TS+  SREE   T+
Sbjct: 749 EASANANSSTSSEESREEKATTS 771


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 216 EMEFTTESNVRDVDVGLETAQXTN 145
           E ++TT+ +  D+DV L T +  N
Sbjct: 21  EDKYTTKYDNVDIDVVLNTERLLN 44


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 216 EMEFTTESNVRDVDVGLETAQXTN 145
           E ++TT+ +  D+DV L T +  N
Sbjct: 21  EDKYTTKYDNVDIDVVLNTERLLN 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,108
Number of Sequences: 438
Number of extensions: 761
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)