Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0623
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_8064| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_41056| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_6084| Best HMM Match : DUF326 (HMM E-Value=1.1) 29 1.8
SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39) 29 1.8
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_41055| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 27 5.4
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_49394| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.2) 27 7.2
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_41057| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 33.9 bits (74), Expect = 0.062
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARK 434
+P P KSP + +P RKS RKT FS +K
Sbjct: 178 TPLPPPSKSPKKSSPKRKSGKRKTSLKFSHKK 209
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.3 bits (65), Expect = 0.77
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPT 416
SP P + +P TPT +P+ KTPT
Sbjct: 60 SPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPT 416
SP P +P Q TPT +PS PT
Sbjct: 40 SPTTPTSTAPTQTTPTPTTPSPTAPT 65
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPT 416
+P P+ +P Q TPT +P+ TPT
Sbjct: 55 TPTTPSPTAPTQTTPTPATPTPTTPT 80
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT 416
P K +P TPT +P+ TPT
Sbjct: 102 PTKPTPTAHTPTTPTPTAHTPT 123
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 345 AH-PAKKSPNQRTPTRKSPSRKTPT 416
AH P K +P TPT +P+ TPT
Sbjct: 119 AHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPT--RKSPSRKTPTNF 422
+P P K+P TPT +P+ TPT F
Sbjct: 121 TPTKPTPKTPTPTTPTPTAHTPTTPTPTTF 150
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT-NFSARKSPAR 446
P+ + P++R P+R+ PSR+ P+ +R+ P+R
Sbjct: 64 PSGRLPSRRLPSRRLPSRRLPSRRLPSRRLPSR 96
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT-NFSARKSPA 443
P+++ P++R P+R+ PSR+ P+ +R+ P+
Sbjct: 69 PSRRLPSRRLPSRRLPSRRLPSRRLPSRRLPS 100
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT-NFSARKSPAR 446
P+ + P+ R P+R+ PSR+ P+ +R+ P+R
Sbjct: 59 PSGRLPSGRLPSRRLPSRRLPSRRLPSRRLPSR 91
Score = 27.5 bits (58), Expect = 5.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT 416
P+++ P+ R P+R+ PSR+ P+
Sbjct: 154 PSRRLPSGRLPSRRLPSRRLPS 175
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT 416
P+ + P++R P+R+ PSR+ P+
Sbjct: 159 PSGRLPSRRLPSRRLPSRRLPS 180
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT-NFSARKSPA 443
P+ + P+ R P+R+ PSR+ P+ +R+ P+
Sbjct: 29 PSGRLPSGRLPSRRLPSRRLPSGRLPSRRLPS 60
>SB_8064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = -3
Query: 327 LEGSFFDFWRE--NETAKLFSLSAPDCL 250
+E SFFDF+RE + +LF++S+P+ L
Sbjct: 110 VESSFFDFYREYDGDIKELFAMSSPELL 137
>SB_41056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 354 AKKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
AKK + TP++K+ S K P A KSP +A
Sbjct: 146 AKKPAAKTTPSKKAKSPKKPAPKKATKSPKKA 177
>SB_6084| Best HMM Match : DUF326 (HMM E-Value=1.1)
Length = 245
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 298 PPEVEKTPLEQGRYLLRILLKNRPTKELQQESRLAGKPQPI 420
P ++KT ++ RY +I K PT L A PQPI
Sbjct: 130 PARLQKTIMKLQRYQFKITYKRGPTLYLADTLSRAALPQPI 170
>SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39)
Length = 370
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 354 AKKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
AKK + TP++K+ S K P A KSP +A
Sbjct: 306 AKKPAAKTTPSKKAKSPKKPAPKKATKSPKKA 337
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPTNFS 425
SP+ P+ SP+ +P+ SPS +P+++S
Sbjct: 8 SPSSPSPDSPSPDSPSSYSPSPDSPSSYS 36
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSA 428
SP P+ SP+ +P+ SPS +P+++S+
Sbjct: 18 SPDSPSSYSPSPDSPSSYSPSLDSPSSYSS 47
>SB_41055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 354 AKKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
AKK + TP++K+ S K P A KSP +A
Sbjct: 146 AKKPAAKTTPSKKAKSPKKPALKKATKSPKKA 177
>SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 354 AKKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
AKK + TP++K+ S K P A KSP +A
Sbjct: 35 AKKPAAKTTPSKKAKSPKKPALKKATKSPKKA 66
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 357 KKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
KKSP + + KSP++ T ++ + KSP +A
Sbjct: 200 KKSPKRSSHEAKSPTKSTSSHDTKSKSPCKA 230
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPTNFSARKS 437
P++++P Q TP++++P + TP+ ++ +S
Sbjct: 310 PSQRAPYQSTPSQRAPYQSTPSQQASYQS 338
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPTNFSARKS 437
P++++P Q TP +++P + TP+ + +S
Sbjct: 250 PSQQAPYQSTPAQQAPYQSTPSQIAPYQS 278
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT 416
P++++P Q TP++++P + TP+
Sbjct: 210 PSQQAPYQSTPSQRAPYQSTPS 231
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT 416
P++++P Q TP++++P + TP+
Sbjct: 220 PSQRAPYQSTPSQQAPYQSTPS 241
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/33 (33%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPTNFSARKS-PAR 446
P++++P Q TP++++P + TP+ + +S PA+
Sbjct: 230 PSQQAPYQSTPSQQAPYQSTPSQQAPYQSTPAQ 262
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/22 (36%), Positives = 18/22 (81%)
Frame = +3
Query: 351 PAKKSPNQRTPTRKSPSRKTPT 416
P++++P Q TP++++P + TP+
Sbjct: 300 PSQQAPYQSTPSQRAPYQSTPS 321
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPS---RKTPTNF 422
+P +K+PN PT+ +P+ RKTP F
Sbjct: 1027 TPTSMPRKTPNTSMPTKSTPTSMPRKTPNTF 1057
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 342 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSP 440
PA P + +++ K PS K P N +AR SP
Sbjct: 3249 PAKPVMPTTHKQQQQEKQPSEKAPEN-AARMSP 3280
>SB_49394| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.2)
Length = 373
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 226 HYE*T-YCNITRVSLICSKINIRTTRNEYIRY 134
HY T YC T SL+C + T + Y RY
Sbjct: 142 HYTYTRYCANTLHSLLCKHTTLATAQTHYTRY 173
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 339 SPAHPAKKSPNQRTPTRKSPSRKTPTN 419
S + P K PN +P+++SP + P N
Sbjct: 1010 STSPPVKPKPNSYSPSQRSPLSEPPVN 1036
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 354 AKKSPNQRTPTRKSPSRKTPT 416
+KK+P + TP + +P++ TPT
Sbjct: 321 SKKTPAKATPAKATPAKATPT 341
>SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 342 PAHPAKKSPNQRTPTRKSPSRKTPTN 419
PA PA + N++ K PS K P N
Sbjct: 735 PAKPAMPTTNKQQQQEKQPSEKAPEN 760
>SB_41057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 357 KKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
KK + TP+ K+ S K P A KSP +A
Sbjct: 233 KKPAAKTTPSNKAKSPKKPAPKKATKSPKKA 263
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 342 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARA 449
P+ K SP+ + T+ S KTP+ A S ++A
Sbjct: 940 PSQDVKPSPDSKPATKPSTDSKTPSAAVASNSDSKA 975
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,186,265
Number of Sequences: 59808
Number of extensions: 231972
Number of successful extensions: 886
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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