Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0620
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 50 9e-07
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 50 9e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 42 3e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 42 3e-04
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 31 0.45
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.45
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 28 5.5
Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF067944-2|AAY86264.1| 97|Caenorhabditis elegans Hypothetical ... 27 9.6
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSXRMVCTNFNXTWQSDCEVYRQ 508
PC C G+ C + + G+ C CI CP + D VC N N T+ S C++YR+
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRE 108
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSXRMVCTNFNXTWQSDCEVYRQ 508
PC C G+ C + + G+ C CI CP + D VC N N T+ S C++YR+
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRE 108
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSXRMVCTNFNXTWQSDCEVYRQDAYASX 526
K C C + E+ A C C DCP YE + + VC T+ S+C + + + S
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 527 TLISA 541
+++A
Sbjct: 575 FVMTA 579
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXTWQSDCEVYRQ 508
PC K+ C C + A C C C D R VC T+ ++CE+ ++
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKK 421
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXTWQSDC 493
PC C G+ C++ C C + C T + VC T+ ++C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 342
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSXRMVCTNFNXTWQSDCEVYRQDAYASX 526
K C C + E+ A C C DCP YE + + VC T+ S+C + + + S
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 527 TLISA 541
+++A
Sbjct: 583 FVMTA 587
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXTWQSDCEVYRQ 508
PC K+ C C + A C C C D R VC T+ ++CE+ ++
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNECEMKKK 429
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXTWQSDC 493
PC C G+ C++ C C + C T + VC T+ ++C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC 350
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXTWQSDCE 496
CS G C G+ MC C D Y S C + C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.45
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAWC 458
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 459 AQTSTXP 479
T T P
Sbjct: 319 KSTPTTP 325
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 285 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAWCAQ 464
++T+ MK+ +T T+ KST + KST T T ++ PT T
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206
Query: 465 TSTXP 479
T T P
Sbjct: 207 TPTTP 211
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAWC 458
TT +T + MK T +T K+ +T + KST T T ++ PT T
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331
Query: 459 AQTSTXP 479
T T P
Sbjct: 332 KSTPTTP 338
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 443
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 183 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 242
Query: 456 CAQTSTXP 479
T T P
Sbjct: 243 MKSTPTTP 250
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255
Query: 456 CAQTSTXP 479
T T P
Sbjct: 256 MKSTPTTP 263
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 209 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 268
Query: 456 CAQTSTXP 479
T T P
Sbjct: 269 MKSTPTTP 276
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 222 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 281
Query: 456 CAQTSTXP 479
T T P
Sbjct: 282 MKSTPTTP 289
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 297 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 356
Query: 456 CAQTSTXP 479
T T P
Sbjct: 357 MKSTPTTP 364
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369
Query: 456 CAQTSTXP 479
T T P
Sbjct: 370 MKSTPTTP 377
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 323 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 382
Query: 456 CAQTSTXP 479
T T P
Sbjct: 383 MKSTPTTP 390
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPXAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 336 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 395
Query: 456 CAQTSTXP 479
T T P
Sbjct: 396 MKSTPTTP 403
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXT--WQSDC 493
C G E + HG + C K CP T+ +C + + T QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSXRMVCTNFNXT--WQSDC 493
C G E + HG + C K CP T+ +C + + T QS+C
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSEC 431
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 191 PAAELLRRWTFSSRGAD--PAVPTPHXLASAVQMTAI 87
P +++ RRW +SRG P+ + H L ++ M A+
Sbjct: 15 PLSKISRRWNLNSRGGAIVPSSTSVHSLGHSISMLAV 51
>Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical
protein F44D12.2 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 341 PCLKVHCSAGRV----CEINEHGDAMCNCIKDCPY 433
P ++ C G V C +N HG+ MC C D Y
Sbjct: 59 PTIQKGCVIGEVAPEGCRVNHHGNVMCFC-SDADY 92
>AF067944-2|AAY86264.1| 97|Caenorhabditis elegans Hypothetical
protein K10C9.9 protein.
Length = 97
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -2
Query: 436 LVGTVLDAVTHGVSVFVDFA-DTSCAAVDFQARVFHVDFFVFILFIRDLVEKVVNS 272
++GTVL V HG S+ A +T C + + R +F+ L E +N+
Sbjct: 9 VIGTVLLGVAHGASIPTTVATETKCTSQEEAVRAVQACIMRLGIFLHQLDELHMNN 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,492,930
Number of Sequences: 27780
Number of extensions: 200781
Number of successful extensions: 707
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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