Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0619
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/41 (21%), Positives = 17/41 (41%)
 Frame = -2

Query: 624 VHYIVRTWFLYGNTVHRYRYFDFLAFRAIFRFGLLQLLWNC 502
           ++++   W        R+     L++  I    L  +LWNC
Sbjct: 251 MYHLAILWSCTSTNCPRFLIMLALSYTVIQEVMLFTILWNC 291


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 268 IEYGANGSKSGKTNSRMSTLLFWQGKGKGN 357
           I+YG   S  G T   +  LL +Q +GK N
Sbjct: 369 IDYGTLYSLFGSTAMNVIILLQFQKQGKYN 398


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 334 WQGKGKGNGAPNGRNW 381
           WQ  G+  G    RNW
Sbjct: 116 WQDSGESPGFTTERNW 131


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 556 SCISRHLSLRTSSVAVEL*FLDCIFDHLE 470
           +CI +  +L  S VA+     D +FD  E
Sbjct: 436 NCIGQRFALLVSKVALASVVKDFVFDPTE 464


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 567 YFDFLAFRAIFRFGLLQLLWNCSFLIASLTTSNA 466
           YF +L+F + FR+G   L+ N    + ++   NA
Sbjct: 584 YFKWLSFLSWFRYGNGALMINQWENVTNIQCPNA 617


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 567 YFDFLAFRAIFRFGLLQLLWNCSFLIASLTTSNA 466
           YF +L+F + FR+G   L+ N    + ++   NA
Sbjct: 584 YFKWLSFLSWFRYGNGALMINQWENVTNIQCPNA 617


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,457
Number of Sequences: 336
Number of extensions: 2968
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)