Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0617
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    26   0.32 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.74 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.1  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 140 CTETLLRERRMNRGGTS-PRTASLTPPP 220
           CT T L+  R +      P++ASL+PPP
Sbjct: 255 CTRTTLKNNRASPYPMQRPKSASLSPPP 282


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 387 VLLNSMRFIYNHVYNVYLCCCAFL 458
           V  NS  + + H++  +  CC F+
Sbjct: 62  VCFNSYMYAFTHIFFFFAICCDFI 85


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 63  Q*HFLHQPRHELFIDSSLY 7
           Q HFLH+ +++L +DS  +
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 63  Q*HFLHQPRHELFIDSSLY 7
           Q HFLH+ +++L +DS  +
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 63  Q*HFLHQPRHELFIDSSLY 7
           Q HFLH+ +++L +DS  +
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 390 LLNSMRFIYNHVYNVYLCCCAFLNMH*FKYTCI 488
           LL    FI+ +++ ++L C  +  +H     CI
Sbjct: 180 LLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCI 212


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 166  ENEQGRNEPEDSIT 207
            ENE G +EP +++T
Sbjct: 974  ENEIGSSEPSETVT 987


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 186 VPPLFILLSLSNV 148
           V PLF+LL +SNV
Sbjct: 157 VYPLFVLLIVSNV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,998
Number of Sequences: 336
Number of extensions: 2786
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)