Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0615
         (667 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ857894-1|ABG77979.1|  499|Homo sapiens neuregulin 3 protein.         31   3.7  
AL589782-1|CAI17213.1|  713|Homo sapiens neuregulin 3 protein.         31   3.7  
AL513204-1|CAH73645.1|  713|Homo sapiens neuregulin 3 protein.         31   3.7  
AL391478-1|CAI15622.1|  713|Homo sapiens neuregulin 3 protein.         31   3.7  
AL354749-1|CAH70641.1|  713|Homo sapiens neuregulin 3 protein.         31   3.7  
AL136085-1|CAH71050.1|  713|Homo sapiens neuregulin 3 protein.         31   3.7  
AL096706-1|CAI22410.1|  713|Homo sapiens neuregulin 3 protein.         31   3.7  

>DQ857894-1|ABG77979.1|  499|Homo sapiens neuregulin 3 protein.
          Length = 499

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 262 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 321


>AL589782-1|CAI17213.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 476 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 535


>AL513204-1|CAH73645.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 476 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 535


>AL391478-1|CAI15622.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 476 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 535


>AL354749-1|CAH70641.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 476 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 535


>AL136085-1|CAH71050.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 476 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 535


>AL096706-1|CAI22410.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -2

Query: 633 SSSLFRSSKQV*KPSPRASFAVTVSNSERYGGSSALADNDEIPCGSRSLRETWSRGPVSV 454
           S  L R++ +   PSPR+     V  + +    S + D D IPC    +R+T S  P+ +
Sbjct: 476 SGMLHRNAFRRTPPSPRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQL 535


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,951,490
Number of Sequences: 237096
Number of extensions: 2415852
Number of successful extensions: 5734
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5734
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)