Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0615
         (667 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g06210.1 68415.m00684 phosphoprotein-related low similarity t...    29   3.7  
At4g25280.1 68417.m03636 adenylate kinase family protein contain...    28   6.4  
At2g28220.1 68415.m03426 aspartyl protease family protein contai...    28   6.4  
At5g21222.1 68418.m02532 protein kinase family protein contains ...    27   8.5  

>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
           phosphoprotein from Mus musculus GI:1236239; contains
           Pfam profile PF00515 TPR Domain
          Length = 1064

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = -3

Query: 530 LWLIMTRSHVAVGHYEKLGAVDQFQLKLEEGYSVPVHSYTSITCHIRYSRETACGS 363
           LWLI+ R       Y K G ++QF+  LEEG S  +  Y +   + R +   A G+
Sbjct: 42  LWLIIARE------YFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGA 91


>At4g25280.1 68417.m03636 adenylate kinase family protein contains
           Pfam profile: PF00406 adenylate kinase
          Length = 249

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 312 HLSMGKV-RHEMLLFADQGPAGSFSGVPNVARDGSITVNRHTVPLLKFQLKLVHGSKFLV 488
           HLS G + R E+ +  + G       + N+ +DG I  +  TV L++ +L+     KFL+
Sbjct: 71  HLSAGDLLRREIAMHTENGAM-----ILNLIKDGKIVPSEVTVKLIQKELESSDNRKFLI 125


>At2g28220.1 68415.m03426 aspartyl protease family protein contains
           Pfam domain, PF00026: eukaryotic aspartyl protease
          Length = 756

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 220 TSCPYTFFRTSCSTCNRSSMASLSLHRFRNTDLPVKSDIFYCFSG 86
           T+  Y+ F +S S     +M  LSL      DLP    I YCFSG
Sbjct: 526 TNLQYSGFASSSSGIVGLNMGPLSL--ISQMDLPYPGLISYCFSG 568


>At5g21222.1 68418.m02532 protein kinase family protein contains
           Pfam profile: PF00069 protein kinase domain
          Length = 831

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +1

Query: 70  IKPESFQKNNRICQTLQEDPYFEIDEVIGKPWRIYYTWNMRFEKKCMDMTFKNATPKIVQ 249
           ++ E  Q N+R C  L +   +     I + W I Y       K   D+   N   K   
Sbjct: 451 LRDEMLQPNDRTCNILVQA--WCNQRKIEEAWNIVYKMQSYGVKP--DVVTFNTLAKAYA 506

Query: 250 RVGTTCTS 273
           R+G+TCT+
Sbjct: 507 RIGSTCTA 514


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,832,874
Number of Sequences: 28952
Number of extensions: 364813
Number of successful extensions: 933
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)